RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 PCYOX1LQ8NBM8 494 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 HMGCLL1Q8TB92 370 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 MRPS26Q9BYN8 205 aaKnown RBP13.52□□□□□ -0.25
VHL-201ENST00000256474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
VHL-201ENST00000256474 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.25
VHL-201ENST00000256474 A8MX80 341 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TMX2-CTNND1H3BSU7 103 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 GOT2P00505 430 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 ASLP04424 464 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 ZNF23P17027 643 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 STT3AP46977 705 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TBX4P57082 545 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 SCAPQ12770 1279 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 SAMD4BQ5PRF9 694 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 TWIST2Q8WVJ9 160 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 DLG3Q92796 817 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 PTPN18Q99952 460 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 GMIPQ9P107 970 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 RNF11Q9Y3C5 154 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 EEF1DP29692 281 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 AGTR2P50052 363 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 RENBPP51606 427 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 C16orf72Q14CZ0 275 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 GDF6Q6KF10 455 aaPredicted RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 TMEM102Q8N9M5 508 aaPredicted RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 GIPC2Q8TF65 315 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TSPAN17Q96FV3 270 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 RTP3Q9BQQ7 232 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 ABCC13Q9NSE7 274 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 OSER1Q9NX31 292 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 PRSS51A0A1B0GVH4 220 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 BNIP3LO60238 219 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TRMUO75648 421 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 IL10P22301 178 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 NDST2P52849 883 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 PRKAA2P54646 552 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 C6orf10Q5SRN2 563 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TAS2R42Q7RTR8 314 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
VHL-201ENST00000256474 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
VHL-201ENST00000256474 SIP14410 1827 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 TARM1B6A8C7 271 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 BTN3A1O00481 513 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 PRDX3P30048 256 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 SLC5A2P31639 672 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 NR1H2P55055 460 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 ESRRGP62508 458 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 RHDQ02161 417 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 GRB14Q14449 540 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 POLD3Q15054 466 aaPredicted RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 PIK3R6Q5UE93 754 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 PM20D1Q6GTS8 502 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 RANBP10Q6VN20 620 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 PARP8Q8N3A8 854 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 CDYL2Q8N8U2 506 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 GABPB2Q8TAK5 448 aaPredicted RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 ISL2Q96A47 359 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 FAM124BQ9H5Z6 455 aaPredicted RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 TBC1D13Q9NVG8 400 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 OAZ3Q9UMX2 235 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 DNAJC15Q9Y5T4 150 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 PTCH2Q9Y6C5 1203 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 DHRS12A0PJE2 317 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 CCDC162PA2VCL2 907 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 TNPO2O14787 897 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 DENRO43583 198 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 NPHS1O60500 1241 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 TFPTP0C1Z6 253 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 OXTRP30559 389 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 GRM2Q14416 872 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 TSNQ15631 228 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 GPR107Q5VW38 600 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 TIGD7Q6NT04 549 aaPredicted RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 BHLHA9Q7RTU4 235 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 HAUS8Q9BT25 410 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 SLAMF8Q9P0V8 285 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 MBLAC1A4D2B0 266 aaPredicted RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 AP3B1O00203 1094 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 MGEA5O60502 916 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 PARNO95453 639 aaKnown RBP13.5□□□□□ -0.25
VHL-201ENST00000256474 HNRNPCP07910 306 aaKnown RBP eCLIP13.5□□□□□ -0.255e-9■□□□□ 9.5
VHL-201ENST00000256474 IRF1P10914 325 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 COL6A2P12110 1019 aa13.5□□□□□ -0.25
VHL-201ENST00000256474 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms