RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 LRRK1Q38SD2 2015 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 CCDC162PA2VCL2 907 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 H7C0S8 307 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 GOLGA8RI6L899 631 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 STX7O15400 261 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 MBTPS2O43462 519 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 SPAG7O75391 227 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 LEFTY1O75610 366 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 GOT2P00505 430 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 CTSLP07711 333 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 RPA3P35244 121 aaPredicted RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 HNF1BP35680 557 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 CCNFP41002 786 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 LEPRP48357 1165 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 POLR2LP62875 67 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 TMPRSS15P98073 1019 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 PPARDQ03181 441 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 ZNF234Q14588 700 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 FNDC3BQ53EP0 1204 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 BRAT1Q6PJG6 821 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 NUDT18Q6ZVK8 323 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 NDUFAF2Q8N183 169 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 PAF1Q8N7H5 531 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 ZNF366Q8N895 744 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 OR4L1Q8NH43 312 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 GRIN3AQ8TCU5 1115 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 DENND1AQ8TEH3 1009 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 KLHL32Q96NJ5 620 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 MCCC1Q96RQ3 725 aaPredicted RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 KLF6Q99612 283 aaPredicted RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 GPR22Q99680 433 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 GPR63Q9BZJ6 419 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 MTG2Q9H4K7 406 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 ZFYVE1Q9HBF4 777 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 TRPV5Q9NQA5 729 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 INTS9Q9NV88 658 aaKnown RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 POLR3BQ9NW08 1133 aaPredicted RBP9.47□□□□□ -0.89
NIP7-202ENST00000254941 IL17CQ9P0M4 197 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 IL36AQ9UHA7 158 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 PKP3Q9Y446 797 aa9.47□□□□□ -0.89
NIP7-202ENST00000254941 PLXNB3Q9ULL4 1909 aa9.46□□□□□ -0.89
NIP7-202ENST00000254941 C1orf232A0A0U1RR37 186 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 EDDM13A0A1B0GTR0 161 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 TSPAN11A1L157 253 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 OR51F1A6NGY5 319 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 NPIPB15A6NHN6 443 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 C2CD4DB7Z1M9 353 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 TPP1O14773 563 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 TM9SF1O15321 606 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 CD3EAPO15446 510 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 HAUS5O94927 633 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 ZWINTO95229 277 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 APODP05090 189 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 F7P08709 466 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 MAGEA12P43365 314 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 MPP1Q00013 466 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 GABPB1Q06547 395 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 AAK1Q2M2I8 961 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 IER5LQ5T953 404 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 TTC19Q6DKK2 380 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 MRNIPQ6NTE8 343 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 AFTPHQ6ULP2 937 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 TPRG1Q6ZUI0 275 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 USP45Q70EL2 814 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 SUGP1Q8IWZ8 645 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 CSGALNACT1Q8TDX6 532 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 ATXN2LQ8WWM7 1075 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 ATXN7L3BQ96GX2 97 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 APOPT1Q96IL0 206 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 FBRSL1Q9HCM7 1045 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 CATSPERZQ9NTU4 200 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 NKIRAS1Q9NYS0 192 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 MARCH4Q9P2E8 410 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 THAP10Q9P2Z0 257 aaPredicted RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 DKK3Q9UBP4 350 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
NIP7-202ENST00000254941 MTO1Q9Y2Z2 717 aaKnown RBP9.46□□□□□ -0.9
NIP7-202ENST00000254941 A0A0U1RQS6 177 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 S1PR4O95977 384 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 SLC4A1P02730 911 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 OGNP20774 298 aaKnown RBP9.45□□□□□ -0.9
NIP7-202ENST00000254941 TYK2P29597 1187 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 LSP1P33241 339 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 ABCG1P45844 678 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 CD151P48509 253 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 POLD2P49005 469 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 CSRP3P50461 194 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 NEK3P51956 506 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 GNGT1P63211 74 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 ILF2Q12905 390 aaKnown RBP9.45□□□□□ -0.9
NIP7-202ENST00000254941 ELAVL3Q14576 367 aaKnown RBP9.45□□□□□ -0.9
NIP7-202ENST00000254941 TERF2Q15554 542 aa9.45□□□□□ -0.9
NIP7-202ENST00000254941 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms