RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZC3H7AQ8IWR0 971 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 FIG4Q92562 907 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 SGCDQ92629 289 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CDCA5Q96FF9 252 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 SMOQ99835 787 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 C1QTNF1Q9BXJ1 281 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PLGRKTQ9HBL7 147 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CRTAC1Q9NQ79 661 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 FBXW11Q9UKB1 542 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 FMO4P31512 558 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 SCNN1GP51170 649 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 ARSDP51689 593 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 KCNK10P57789 538 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CMTR2Q8IYT2 770 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 RMDN1Q96DB5 314 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 SMIM14Q96QK8 99 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 RBM38Q9H0Z9 239 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 ABI2Q9NYB9 513 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 AASSQ9UDR5 926 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 UBFD1O14562 309 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 GSTA4O15217 222 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PAGE1O75459 146 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 RSL1D1O76021 490 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PENKP01210 267 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CAPN3P20807 821 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 EIF2B2P49770 351 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 MTPNP58546 118 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 LAPTM4AQ15012 233 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 EGFLAMQ63HQ2 1017 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 CDYL2Q8N8U2 506 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 MRPL40Q9NQ50 206 aaKnown RBP11.98□□□□□ -0.49
USHBP1-201ENST00000252597 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 SLC8A2Q9UPR5 921 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 IPPQ9Y573 584 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PPP2R3BQ9Y5P8 575 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 PTPRFP10586 1907 aa11.98□□□□□ -0.49
USHBP1-201ENST00000252597 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 LOXHD1Q8IVV2 1947 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ASB14A6NK59 587 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 J3KR12 359 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 RHOBTB1O94844 696 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ALDOCP09972 364 aaKnown RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 HMOX2P30519 316 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 HADHAP40939 763 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 PAQR9Q6ZVX9 377 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 CYS1Q717R9 158 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 HS3ST5Q8IZT8 346 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 SMG8Q8ND04 991 aaKnown RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 CDC26Q8NHZ8 85 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 DQX1Q8TE96 717 aaKnown RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 TCAF1Q9Y4C2 921 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ST14Q9Y5Y6 855 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 MCM3APO60318 1980 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 TTC3P53804 2025 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 CDKN2DP55273 166 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 LRP8Q14114 963 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 RAB39AQ14964 217 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ADRM1Q16186 407 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 CRYBG2Q8N1P7 616 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 FNDC5Q8NAU1 212 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 HMGCLL1Q8TB92 370 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 MYLPFQ96A32 169 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ITCHQ96J02 903 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 TMEM209Q96SK2 561 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 THUMPD3Q9BV44 507 aaKnown RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 WDR6Q9NNW5 1121 aaKnown RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 UXTQ9UBK9 157 aaPredicted RBP11.97□□□□□ -0.49
USHBP1-201ENST00000252597 ZMYM5Q9UJ78 669 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 RNF112Q9ULX5 631 aa11.97□□□□□ -0.49
USHBP1-201ENST00000252597 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ARPC2O15144 300 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 MTSS1O43312 755 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SLC25A27O95847 323 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 BCL10O95999 233 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 GEMP55040 296 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SH3BP2P78314 561 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 LIPEQ05469 1076 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SLC10A7Q0GE19 358 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 TRIM16LQ309B1 348 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 PIWIL3Q7Z3Z3 882 aaKnown RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 TMEM151AQ8N4L1 468 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 OR13C4Q8NGS5 318 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 FNDC8Q8TC99 324 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ALG2Q9H553 416 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 BPIFA1Q9NP55 256 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 NSMCE4AQ9NXX6 385 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ARL5AQ9Y689 179 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 K7EPI3 171 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ZSCAN9O15535 394 aaPredicted RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 TOMM70O94826 608 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 GUCA1CO95843 209 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 TBX18O95935 607 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 LDLRP01130 860 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms