RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 NDE1Q9NXR1 346 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 ANKRD36A6QL64 1941 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 RGSL1A5PLK6 1076 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 NVLO15381 856 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 TBL1XO60907 577 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 HNRNPLP14866 589 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDX49-201ENST00000247003 CR2P20023 1033 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 ITGAXP20702 1163 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 RGRP47804 291 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 NUDT2P50583 147 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 PLK1P53350 603 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 EPHB1P54762 984 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 TBL3Q12788 808 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 CYLC2Q14093 348 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 PTPRCAPQ14761 206 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CYTH1Q15438 398 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 LRRC74BQ6ZQY2 392 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CUZD1Q86UP6 607 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 RYBPQ8N488 228 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 CPSF7Q8N684 471 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 KDM1BQ8NB78 822 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 OR4K2Q8NGD2 314 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 LENG8Q96PV6 779 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 TCF12Q99081 682 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 SERPINI1Q99574 410 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 AARSD1Q9BTE6 412 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 TMEM39AQ9NV64 488 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 SPG21Q9NZD8 308 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CDH22Q9UJ99 828 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 G3BP2Q9UN86 482 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 ATP11BQ9Y2G3 1177 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 FIS1Q9Y3D6 152 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 INSL5Q9Y5Q6 135 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 ABHD14A-ACY1A0A1B0GW23 586 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 VGLL3A8MV65 326 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CCNT2O60583 730 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 NDUFS3O75489 264 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 SKAP2O75563 359 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 RHOBTB1O94844 696 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 TMCC1O94876 653 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 WISP3O95389 354 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 ZNF37AP17032 561 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 IMPDH1P20839 514 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 LPOP22079 712 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 GCKP35557 465 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 SUOXP51687 545 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 NFKB2Q00653 900 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CREMQ03060 361 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CDH18Q13634 790 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 HERC3Q15034 1050 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 PABPC1LQ4VXU2 614 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 RALGPS1Q5JS13 557 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 CXorf57Q6NSI4 855 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 FAM117BQ6P1L5 589 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 TLDC1Q6P9B6 456 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 DNAJB7Q7Z6W7 309 aaPredicted RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 EXT2Q93063 718 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 TOP1MTQ969P6 601 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 L3HYPDHQ96EM0 354 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 OSBPL1AQ9BXW6 950 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 MRPL17Q9NRX2 175 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 TAS2R13Q9NYV9 303 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 VPS28Q9UK41 221 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 LSM7Q9UK45 103 aaKnown RBP15.13■□□□□ 0.01
DDX49-201ENST00000247003 MAFFQ9ULX9 164 aa15.13■□□□□ 0.01
DDX49-201ENST00000247003 PLXNA4Q9HCM2 1894 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 TMEM233B4DJY2 109 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 SRP72O76094 671 aaKnown RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 SUPT7LO94864 414 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 PYGLP06737 847 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 CD1DP15813 335 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 CA8P35219 290 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 RHOAP61586 193 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 ARF5P84085 180 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 SULT2A1Q06520 285 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 SEMA3AQ14563 771 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 AARS2Q5JTZ9 985 aaKnown RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 AAGABQ6PD74 315 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 ISCA2Q86U28 154 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 MYLK4Q86YV6 388 aaPredicted RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 TCEAL8Q8IYN2 117 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 DNAJC9Q8WXX5 260 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 MAELQ96JY0 434 aaKnown RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 ZNF570Q96NI8 536 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDX49-201ENST00000247003 HACD3Q9P035 362 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 PRPF19Q9UMS4 504 aaKnown RBP15.12■□□□□ 0.01
DDX49-201ENST00000247003 SPO11Q9Y5K1 396 aa15.12■□□□□ 0.01
DDX49-201ENST00000247003 AIM2O14862 343 aa15.11■□□□□ 0.01
DDX49-201ENST00000247003 MAP3K7O43318 606 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms