RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 ANPEPP15144 967 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SLC26A3P40879 764 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 PPP3CCP48454 512 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 ACVR1Q04771 509 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 BLMHQ13867 455 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 LBRQ14739 615 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 RALGPS1Q5JS13 557 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 FRMD7Q6ZUT3 714 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SETD3Q86TU7 594 aaPredicted RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 ITIH5Q86UX2 942 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CILP2Q8IUL8 1156 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 KDM1BQ8NB78 822 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SCG3Q8WXD2 468 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 UBXN10Q96LJ8 280 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 ZNF599Q96NL3 588 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 RAD9AQ99638 391 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 C2orf78A6NCI8 922 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 F5H5T6 163 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TGM5O43548 720 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 KRT34O76011 436 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CSPG5O95196 566 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CXCL14O95715 111 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TACR2P21452 398 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 PIK3R1P27986 724 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CCR10P46092 362 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 PFKPQ01813 784 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 HERC3Q15034 1050 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 ACAP2Q15057 778 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SKIV2LQ15477 1246 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TECRLQ5HYJ1 363 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 RBM20Q5T481 1227 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 NADSYN1Q6IA69 706 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TRIM67Q6ZTA4 783 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TXNDC5Q8NBS9 432 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 JADE3Q92613 823 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 PLD4Q96BZ4 506 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 MOCOSQ96EN8 888 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 FEM1CQ96JP0 617 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 MAELQ96JY0 434 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 LENG8Q96PV6 779 aaPredicted RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 OLFM1Q99784 485 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 WDR55Q9H6Y2 383 aaPredicted RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 GEMIN8Q9NWZ8 242 aaKnown RBP12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CDH22Q9UJ99 828 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 RIMKLBQ9ULI2 386 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 CDYLQ9Y232 598 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 VWA7Q9Y334 891 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
SNAI1-201ENST00000244050 TRPC5OSA6NMA1 111 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 MAP3K7O43318 606 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 LDB2O43679 373 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 ACSL4O60488 711 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 S1PR4O95977 384 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
SNAI1-201ENST00000244050 LRG1P02750 347 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 ADH1AP07327 375 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 HOXB8P17481 243 aaPredicted RBP12.72□□□□□ -0.37
SNAI1-201ENST00000244050 HLA-DPA1P20036 260 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 OR1E1P30953 314 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 CTNNB1P35222 781 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 ABL2P42684 1182 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 SLC11A2P49281 568 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 GALNT1Q10472 559 aaPredicted RBP12.72□□□□□ -0.37
SNAI1-201ENST00000244050 CUL3Q13618 768 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 CSHL1Q14406 222 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 HECTD2Q5U5R9 776 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 KLC3Q6P597 504 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 ZNF354CQ86Y25 554 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 DEFB107AQ8IZN7 70 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 LGI2Q8N0V4 545 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 SPATA6LQ8N4H0 392 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 AGR3Q8TD06 166 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
SNAI1-201ENST00000244050 HDAC10Q969S8 669 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 FAM136AQ96C01 138 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 FAR2Q96K12 515 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 TCF25Q9BQ70 676 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 NUF2Q9BZD4 464 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 POLR1EQ9GZS1 481 aaKnown RBP12.72□□□□□ -0.37
SNAI1-201ENST00000244050 PDFQ9HBH1 243 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 S100A14Q9HCY8 104 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 LRCH1Q9Y2L9 728 aa12.72□□□□□ -0.37
SNAI1-201ENST00000244050 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
SNAI1-201ENST00000244050 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
SNAI1-201ENST00000244050 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
SNAI1-201ENST00000244050 IPO13O94829 963 aaKnown RBP12.71□□□□□ -0.37
SNAI1-201ENST00000244050 FGF1P05230 155 aa12.71□□□□□ -0.37
SNAI1-201ENST00000244050 IRF1P10914 325 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms