RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TMEM120AQ9BXJ8 343 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 TRIM6Q9C030 488 aaPredicted RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 STN1Q9H668 368 aaKnown RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 KCNK13Q9HB14 408 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 DNAJC28Q9NX36 388 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 HEY2Q9UBP5 337 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 FZD10Q9ULW2 581 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 SORCS3Q9UPU3 1222 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 L3MBTL1Q9Y468 752 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
CXCR4-201ENST00000241393 KAT6AQ92794 2004 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF236Q9UL36 1845 aa8□□□□□ -1.13
CXCR4-201ENST00000241393 A0A0G2JND7 137 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 KLHL33A6NCF5 533 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 SDR42E2A6NKP2 422 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 A8MUI8 341 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 CXorf49A8MYA2 514 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PDHXO00330 501 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PPEF2O14830 753 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PEX11AO75192 247 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 LUC7L3O95232 432 aaKnown RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 MPIG6BO95866 241 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 MT-CO1P00395 513 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 BPGMP07738 259 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 CSH1P0DML2 217 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 CSH2P0DML3 217 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 BGNP21810 368 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 LRPAP1P30533 357 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 EPHX2P34913 555 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 MC3RP41968 323 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 GLRBP48167 497 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 GPR15P49685 360 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 ZNF135P52742 658 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 MRPS5P82675 430 aaKnown RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 ZBTB16Q05516 673 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 SLC10A2Q12908 348 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PIN1Q13526 163 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PAFAH1B3Q15102 231 aaKnown RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PDK1Q15118 436 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 INSCQ1MX18 579 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 ACCSLQ4AC99 568 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 CDHR3Q6ZTQ4 885 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 KANSL1Q7Z3B3 1105 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 GPR142Q7Z601 462 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 DPP9Q86TI2 863 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 APPL2Q8NEU8 664 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 C18orf25Q96B23 403 aaPredicted RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 HIST1H2AHQ96KK5 128 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 HIST1H2AJQ99878 128 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 GORASP1Q9BQQ3 440 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 EIF2AQ9BY44 585 aaKnown RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 B3GNT5Q9BYG0 378 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 WWP1Q9H0M0 922 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 FAM96AQ9H5X1 160 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 DCLRE1BQ9H816 532 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 SETD4Q9NVD3 440 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 IGSF9Q9P2J2 1179 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 STAP1Q9ULZ2 295 aa7.99□□□□□ -1.13
CXCR4-201ENST00000241393 PDCD11Q14690 1871 aaKnown RBP7.99□□□□□ -1.13
CXCR4-201ENST00000241393 SMIM28A0A1B0GU29 152 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 TCAF2A6NFQ2 919 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 LIN7AO14910 233 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 HUS1O60921 280 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 GLRA3O75311 464 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SNNO75324 88 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PIAS1O75925 651 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 TPBGLP0DKB5 382 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SMIM10L2AP0DMW4 78 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SMIM10L2BP0DMW5 78 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CYP2C9P11712 490 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CCDC130P13994 396 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PGAM1P18669 254 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 GNAZP19086 355 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 EPHB2P29323 1055 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SERPINB3P29508 390 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 GCKP35557 465 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NRG3P56975 720 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ADAM17P78536 824 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NIPAL4Q0D2K0 466 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 BST1Q10588 318 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 WASHC5Q12768 1159 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 OVGP1Q12889 678 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 MTM1Q13496 603 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SPIDRQ14159 915 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CRYMQ14894 314 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 FAM110CQ1W6H9 321 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 TEX44Q53QW1 395 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ANKRD20A2Q5SQ80 823 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 FAXCQ5TGI0 409 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ANKRD20A1Q5TYW2 823 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 C4orf50Q6ZRC1 276 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PDZD4Q76G19 769 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PLEKHH3Q7Z736 793 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CRLF3Q8IUI8 442 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NUDCD3Q8IVD9 361 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ADGRF2Q8IZF7 708 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CBARPQ8N350 705 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms