RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TIMM13Q9Y5L4 95 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-201ENST00000240185 E5RJQ4 531 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 H0Y858 1186 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 IFNA7P01567 189 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 BPGMP07738 259 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 CPSF6Q16630 551 aaKnown RBP eCLIP13.87□□□□□ -0.198e-8■■■□□ 17.3
TARDBP-201ENST00000240185 TRAPPC5Q8IUR0 188 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 FITM2Q8N6M3 262 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 RAB2BQ8WUD1 216 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 FATE1Q969F0 183 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 AIFM2Q9BRQ8 373 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 TKTL2Q9H0I9 626 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 TAS2R14Q9NYV8 317 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 CKLFQ9UBR5 152 aa13.87□□□□□ -0.19
TARDBP-201ENST00000240185 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 GPR182O15218 404 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 IGSF6O95976 241 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ICAM1P05362 532 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PAEPP09466 180 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 CDH13P55290 713 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TAS2R41P59536 307 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PPM1LQ5SGD2 360 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 HHIPL2Q6UWX4 724 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TCRBV9S1A1TA0A576 114 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 FABP12A6NFH5 140 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 H3BM21 787 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 UGT2B17O75795 530 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 THPOP40225 353 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 CDH8P55286 799 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 SNAPC1Q16533 368 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 DOK6Q6PKX4 331 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 OR10H1Q9Y4A9 318 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TRAF6Q9Y4K3 522 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 RSL1D1O76021 490 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 CXCR2P25025 360 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 CCNYL2Q5T2Q4 361 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 FBXO44Q9H4M3 255 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 RAB23Q9ULC3 237 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ERN1O75460 977 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ITGAVP06756 1048 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 AQP1P29972 269 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 CPT1AP50416 773 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 SOX10P56693 466 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ZNF280DQ6N043 979 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 LAPTM4BQ86VI4 370 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 IQCKQ8N0W5 287 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PDE10AQ9Y233 779 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 SLC28A2O43868 658 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 NDUFS2O75306 463 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 SLC25A12O75746 678 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 MAPTP10636 758 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PSKH1P11801 424 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 PRKCIP41743 596 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 NRG3P56975 720 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 SGCGQ13326 291 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TOMM20Q15388 145 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 KHDC1Q4VXA5 237 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 HDAC2Q92769 488 aaKnown RBP13.86□□□□□ -0.19
TARDBP-201ENST00000240185 FEM1AQ9BSK4 669 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 TRIM2Q9C040 744 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 IKZF2Q9UKS7 526 aa13.86□□□□□ -0.19
TARDBP-201ENST00000240185 ABHD14A-ACY1A0A1B0GW23 586 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 SERPINA3P01011 423 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 MT-ND1P03886 318 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CSH1P0DML2 217 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CSH2P0DML3 217 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 AP2S1P53680 142 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 TAF1CQ15572 869 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CPSF7Q8N684 471 aaKnown RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 EPS8L1Q8TE68 723 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 PPM1MQ96MI6 270 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CDK5RAP1Q96SZ6 601 aaKnown RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 ASB8Q9H765 288 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 IFT80Q9P2H3 777 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 ALOX15BO15296 676 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 ERAL1O75616 437 aaKnown RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 PGLSO95336 258 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CYP2A6P11509 494 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-201ENST00000240185 PTPRNQ16849 979 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 ANXA8L1Q5VT79 327 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 LRRC38Q5VT99 294 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 SLC2A14Q8TDB8 520 aa13.85□□□□□ -0.19
TARDBP-201ENST00000240185 CNPPD1Q9BV87 410 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms