RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 POLR1EQ9GZS1 481 aaKnown RBP12.78□□□□□ -0.36
PDZD11-201ENST00000239666 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 PHPT1Q9NRX4 125 aaPredicted RBP12.78□□□□□ -0.36
PDZD11-201ENST00000239666 THSD1Q9NS62 852 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 IFNKQ9P0W0 207 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 GGT7Q9UJ14 662 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 PADI4Q9UM07 663 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 ANKRD36A6QL64 1941 aa12.78□□□□□ -0.36
PDZD11-201ENST00000239666 A0A087X0T9 212 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 EIF4E1BA6NMX2 242 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 YY2O15391 372 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 SPINT1O43278 529 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 MAFKO60675 156 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 RECQL5O94762 991 aaPredicted RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 FAM228BP0C875 321 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 PNLIPP16233 465 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ZNF30P17039 623 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 AMPD1P23109 780 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 CCNCP24863 283 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 TEAD1P28347 426 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 RBMS1P29558 406 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 WDR4P57081 412 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 PCBP4P57723 403 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 RPL26P61254 145 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 SLC10A7Q0GE19 358 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 SPIDRQ14159 915 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ACOX1Q15067 660 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 DEFB133Q30KQ1 61 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ARMC12Q5T9G4 340 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 BZW1Q7L1Q6 419 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 EFL1Q7Z2Z2 1120 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 NLRP8Q86W28 1048 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 ARL14Q8N4G2 192 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 LSM14AQ8ND56 463 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 OR56A4Q8NGH8 313 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 VOPP1Q96AW1 172 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 TMEM159Q96B96 161 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 SCRN2Q96FV2 425 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 LRRC61Q9BV99 259 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 DPH1Q9BZG8 443 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 STRADBQ9C0K7 418 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 WDR26Q9H7D7 661 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 PCDH18Q9HCL0 1135 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 RPL26L1Q9UNX3 145 aaKnown RBP12.77□□□□□ -0.37
PDZD11-201ENST00000239666 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
PDZD11-201ENST00000239666 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 ZNF487B1APH4 448 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 MATN3O15232 486 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 AKR1B10O60218 316 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 USP12O75317 370 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CSO75390 466 aaKnown RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CPP00450 1065 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 ZFXP17010 805 aaPredicted RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CASP14P31944 242 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 VIPR1P32241 457 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 MAN1A1P33908 653 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 ITKQ08881 620 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PAFAH1B3Q15102 231 aaKnown RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CDKN3Q16667 212 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CLPPQ16740 277 aaPredicted RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 LRRC73Q5JTD7 316 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 E4F1Q66K89 784 aaPredicted RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PNCKQ6P2M8 343 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PDZD3Q86UT5 571 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 RHOT2Q8IXI1 618 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 TEX26Q8N6G2 289 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 NPWQ8N729 165 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PDCD6IPQ8WUM4 868 aaKnown RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 HNRNPLLQ8WVV9 542 aaKnown RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CCDC42Q96M95 316 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
PDZD11-201ENST00000239666 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PPIL1Q9Y3C6 166 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 PCDHGA8Q9Y5G5 932 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 FREM2Q5SZK8 3169 aa12.76□□□□□ -0.37
PDZD11-201ENST00000239666 SPEGQ15772 3267 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GCATO75600 419 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 PROSCO94903 275 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 ZIC2O95409 532 aaPredicted RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 APC2O95996 2303 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GYPCP04921 128 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 PCCBP05166 539 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 TMEM253P0C7T8 217 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms