RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FZD6O60353 706 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 GJB3O75712 270 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 EPOP01588 193 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 TRBC1P01850 177 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 FGGP02679 453 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 C6P13671 934 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 PRLRP16471 622 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 RABIFP47224 123 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ARRB1P49407 418 aaPredicted RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 GEMP55040 296 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 GRIK2Q13002 908 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 SLC14A1Q13336 389 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 MPP3Q13368 585 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 PTK2BQ14289 1009 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 SUZ12Q15022 739 aaKnown RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 LRRC14Q15048 493 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 AGERQ15109 404 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 P3H1Q32P28 736 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ZNF567Q8N184 647 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 TMEM145Q8NBT3 493 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ATL2Q8NHH9 583 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 CCHCR1Q8TD31 782 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 PIH1D2Q8WWB5 315 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 CAMK1GQ96NX5 476 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 MCCC1Q96RQ3 725 aaPredicted RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ORAI3Q9BRQ5 295 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 WRAP53Q9BUR4 548 aaKnown RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ERVMER34-1Q9H9K5 563 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 EBF2Q9HAK2 575 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 B4GALT6Q9UBX8 382 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 CHKBQ9Y259 395 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 CELSR3Q9NYQ7 3312 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 A0A1B0GVT2 93 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 C5orf60A6NFR6 353 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD66B4E2M5 251 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 CES2O00748 559 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ENC1O14682 589 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 PSMD3O43242 534 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
SF3B6-201ENST00000233468 PYGLP06737 847 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 MMP2P08253 660 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 THEGLP0DJG4 465 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 NFKB1P19838 968 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 GNG11P61952 73 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 YPEL5P62699 121 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 SIM1P81133 766 aaPredicted RBP11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ACOX1Q15067 660 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 CCNG2Q16589 344 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD20A2Q5SQ80 823 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD20A1Q5TYW2 823 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 DRICH1Q6PGQ1 229 aaPredicted RBP11.3□□□□□ -0.6
SF3B6-201ENST00000233468 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 LIPIQ6XZB0 460 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 KYAT3Q6YP21 454 aaKnown RBP11.3□□□□□ -0.6
SF3B6-201ENST00000233468 B4GALNT4Q76KP1 1039 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ABI3BPQ7Z7G0 1075 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 SLC35F6Q8N357 371 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 CHCHD4Q8N4Q1 142 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 MINDY1Q8N5J2 469 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 FAM71DQ8N9W8 422 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 SLC35B2Q8TB61 432 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 KLK6Q92876 244 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 LYSMD1Q96S90 227 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 HERPUD2Q9BSE4 406 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 GBA3Q9H227 469 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 RAD18Q9NS91 495 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 ZNF148Q9UQR1 794 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 LAMA5O15230 3695 aa11.3□□□□□ -0.6
SF3B6-201ENST00000233468 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CHD5Q8TDI0 1954 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 GOLGA6L10A0A0M3HER8 536 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 A0A1W2PR77 199 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 RGSL1A5PLK6 1076 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CAPN8A6NHC0 703 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 WNT9AO14904 365 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 SPINT1O43278 529 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 LIASO43766 372 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PMPCBO75439 489 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 GCATO75600 419 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 RECQL5O94762 991 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 NDST3O95803 873 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PRKCGP05129 697 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PDHA1P08559 390 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 ZNF883P0CG24 379 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CD59P13987 128 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 TCP1P17987 556 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms