RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 INSRRP14616 1297 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC7A1P30825 629 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 TMEM135Q86UB9 458 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PSD4Q8NDX1 1056 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SPPL2BQ8TCT7 592 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 EDEM1Q92611 657 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SH3YL1Q96HL8 342 aaPredicted RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 TCF12Q99081 682 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 MLPHQ9BV36 600 aaPredicted RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 FAM49AQ9H0Q0 323 aaPredicted RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 NEK6Q9HC98 313 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SETD4Q9NVD3 440 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ANKMY1Q9P2S6 941 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PGAP2Q9UHJ9 254 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 FZD10Q9ULW2 581 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PCDHGA8Q9Y5G5 932 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SCN1AP35498 2009 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 TRPC5OSA6NMA1 111 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 GOLGA8CPA6NN73 597 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 HACD1B0YJ81 288 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 ALOX5P09917 674 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 DCKP27707 260 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 NAB1Q13506 487 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 TNFAIP1Q13829 316 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 NHSL2Q5HYW2 709 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 CYP2U1Q7Z449 544 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 DDIASQ8IXT1 998 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 POC5Q8NA72 575 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 HMGCLL1Q8TB92 370 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 OSCP1Q8WVF1 389 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 ELMO1Q92556 727 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 FIG4Q92562 907 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 TFAP2CQ92754 450 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 FAM167AQ96KS9 214 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 MED10Q9BTT4 135 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 OSBPL2Q9H1P3 480 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 LRRC4Q9HBW1 653 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 PIGVQ9NUD9 493 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 MTF2Q9Y483 593 aaPredicted RBP14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 OXTRP30559 389 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 CCT8P50990 548 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 STX1BP61266 288 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 CYP51A1Q16850 503 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF354CQ86Y25 554 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 ANKRD13BQ86YJ7 626 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 TMEM151AQ8N4L1 468 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 ZFP90Q8TF47 636 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 NANOGQ9H9S0 305 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 AS3MTQ9HBK9 375 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 PRMT7Q9NVM4 692 aaPredicted RBP14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
PCDHB3-201ENST00000231130 IGKV6D-21A0A0A0MT36 114 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF701M0R085 212 aaPredicted RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 XYLBO75191 536 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 PCNAP12004 261 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CDH1P12830 882 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CD68P34810 354 aaPredicted RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 RBM20Q5T481 1227 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CCSAPQ6IQ19 270 aaPredicted RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CCDC81Q6ZN84 652 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC26A9Q7LBE3 791 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CUZD1Q86UP6 607 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 ELMOD1Q8N336 334 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CPSF7Q8N684 471 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 NPWQ8N729 165 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 STYXQ8WUJ0 223 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 GLMNQ92990 594 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 GPR20Q99678 358 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 DHRS12A0PJE2 317 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 PTGES3LE9PB15 166 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 MSI1O43347 362 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 H2AFYO75367 372 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 BEST1O76090 585 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 C8BP07358 591 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 IL10P22301 178 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 PTPN9P43378 593 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 SNX16P57768 344 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 RAB10P61026 200 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 PIGFQ07326 219 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 INCA1Q0VD86 236 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 BST2Q10589 180 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 SAMD4BQ5PRF9 694 aaKnown RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 TSTD2Q5T7W7 516 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 RHOJQ9H4E5 214 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 IFT80Q9P2H3 777 aaPredicted RBP14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 SHROOM3Q8TF72 1996 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 PPP6CO00743 305 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 CCNKO75909 580 aa14.17□□□□□ -0.14
PCDHB3-201ENST00000231130 NADKO95544 446 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms