RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SCN4BQ8IWT1 228 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 TADA1Q96BN2 335 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 MPP4Q96JB8 637 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 C3orf30Q96M34 536 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 ZYG11BQ9C0D3 744 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 TTC24A2A3L6 582 aaPredicted RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 CNTN5O94779 1100 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 SLC7A2P52569 658 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 HERVK_113P63132 956 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 MYBPC3Q14896 1274 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 UGT3A2Q3SY77 523 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 ALFQ53S48 1182 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 MTX3Q5HYI7 312 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 LAYNQ6UX15 382 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 CYP2R1Q6VVX0 501 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 RBM12BQ8IXT5 1001 aaKnown RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 TEX26Q8N6G2 289 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 UROC1Q96N76 676 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 ERVK-6Q9BXR3 956 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 CNOT6Q9ULM6 557 aaKnown RBP16.3■□□□□ 0.2
LTBR-201ENST00000228918 DMTF1Q9Y222 760 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 KCTD3Q9Y597 815 aa16.3■□□□□ 0.2
LTBR-201ENST00000228918 A0A0U1RQF3 1178 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 LDB2O43679 373 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 KPNA6O60684 536 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 CD1DP15813 335 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 GPX3P22352 226 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 FDXRP22570 491 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 FGFR3P22607 806 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 STX1BP61266 288 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 YWHAHQ04917 246 aaPredicted RBP16.29■□□□□ 0.2
LTBR-201ENST00000228918 TNK2Q07912 1038 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 DSC3Q14574 896 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 MS4A13Q5J8X5 152 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 IRAK1BP1Q5VVH5 260 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 HMBOX1Q6NT76 420 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 ARRDC2Q8TBH0 407 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 PSMG2Q969U7 264 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 PBXIP1Q96AQ6 731 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 ROPN1LQ96C74 230 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 RNF11Q9Y3C5 154 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 SNX13Q9Y5W8 968 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
LTBR-201ENST00000228918 DUSP11O75319 330 aaKnown RBP16.29■□□□□ 0.2
LTBR-201ENST00000228918 TBX4P57082 545 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 SLC39A12Q504Y0 691 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 CARM1Q86X55 608 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 CLYBLQ8N0X4 340 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 PGBD5Q8N414 524 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 ZFP28Q8NHY6 868 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 SLC39A3Q9BRY0 314 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 SCML2Q9UQR0 700 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 CRYL1Q9Y2S2 319 aa16.29■□□□□ 0.2
LTBR-201ENST00000228918 LOC285095A0A1B0GVY8 99 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 BBIP1A8MTZ0 92 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 SLC4A1P02730 911 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 SLC2A3P11169 496 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 NR1H2P55055 460 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 USP46P62068 366 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 ACVR1Q04771 509 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 ZNF549Q6P9A3 640 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 BORAQ6PGQ7 559 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 AMIGO2Q86SJ2 522 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 RETREG3Q86VR2 466 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 MON1AQ86VX9 555 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 OR52K2Q8NGK3 314 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 EXT2Q93063 718 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 AKTIPQ9H8T0 292 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 ABI2Q9NYB9 513 aaPredicted RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 DNAJC15Q9Y5T4 150 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 ANKRD36A6QL64 1941 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 IGLV3-10A0A075B6K4 115 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 A0A1B0GTW7 788 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 ZSCAN9O15535 394 aaPredicted RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 TRPA1O75762 1119 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 CDH13P55290 713 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 SH3BP2P78314 561 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 TIAL1Q01085 375 aaKnown RBP eCLIP16.28■□□□□ 0.2
LTBR-201ENST00000228918 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 ADRM1Q16186 407 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 DHFR2Q86XF0 187 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 TBATAQ96M53 351 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
LTBR-201ENST00000228918 GPATCH1Q9BRR8 931 aaKnown RBP16.28■□□□□ 0.2
LTBR-201ENST00000228918 EFHD1Q9BUP0 239 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms