RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZNF549Q6P9A3 640 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 MFN1Q8IWA4 741 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 HMGCLL1Q8TB92 370 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 DUS3LQ96G46 650 aaKnown RBP21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 DNAJC1Q96KC8 554 aaKnown RBP21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 AARSD1Q9BTE6 412 aaKnown RBP21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 TNFRSF12AQ9NP84 129 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 MTMR11A4FU01 709 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 BBIP1A8MTZ0 92 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 H7C4K7 107 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 TRIM24O15164 1050 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 STX1BP61266 288 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 MBTPS1Q14703 1052 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 IRAK1BP1Q5VVH5 260 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 NADSYN1Q6IA69 706 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 UGT2A3Q6UWM9 527 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 FAM43BQ6ZT52 329 aaPredicted RBP21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 LDB1Q86U70 411 aaPredicted RBP21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 TTC9BQ8N6N2 239 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 OR4L1Q8NH43 312 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 BLOC1S5Q8TDH9 187 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 CEP295NLQ96MC4 621 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 SYTL2Q9HCH5 934 aa21.99■■□□□ 1.11
SMARCD2-201ENST00000225742 ANKRD36A6QL64 1941 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 THSD7BQ9C0I4 1608 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 TTC24A2A3L6 582 aaPredicted RBP21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 OR51F1A6NGY5 319 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 CAPN8A6NHC0 703 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 H0YJX3 145 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 STX16-NPEPL1H3BU86 382 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 UBFD1O14562 309 aaKnown RBP21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 TRPA1O75762 1119 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 CRTAMO95727 393 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 HMBSP08397 361 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 PSMA3P25788 255 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 PEX19P40855 299 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 KCNC1P48547 511 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 ZFAND2BQ8WV99 257 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 PTERQ96BW5 349 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 ROPN1LQ96C74 230 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 C19orf60Q96EN9 201 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 MGME1Q9BQP7 344 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 NDUFA13Q9P0J0 144 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 SEPT3Q9UH03 358 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 CRYL1Q9Y2S2 319 aa21.98■■□□□ 1.11
SMARCD2-201ENST00000225742 CCL22O00626 93 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 FBP2O00757 339 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 NRP2O60462 931 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 CES1P23141 567 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 STC1P52823 247 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 ELAVL2Q12926 359 aaKnown RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 UGT3A2Q3SY77 523 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 LIN52Q52LA3 116 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 SAMD4BQ5PRF9 694 aaKnown RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 SLC30A9Q6PML9 568 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 SPATA24Q86W54 205 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 GPR152Q8TDT2 470 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 TRIB3Q96RU7 358 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 TCF12Q99081 682 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 COPS7BQ9H9Q2 264 aaPredicted RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 SLC24A3Q9HC58 644 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 SPAG4Q9NPE6 437 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 NLE1Q9NVX2 485 aaPredicted RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 POLR3BQ9NW08 1133 aaPredicted RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 CROTQ9UKG9 612 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 ARIH1Q9Y4X5 557 aaPredicted RBP21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 CHD5Q8TDI0 1954 aa21.97■■□□□ 1.11
SMARCD2-201ENST00000225742 CCDC189A1A4V9 331 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 E7ENX8 843 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TXNDC9O14530 226 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 MRASO14807 208 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 MUSKO15146 869 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 SRP72O76094 671 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 SLC4A1P02730 911 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ZNF37AP17032 561 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TIAL1Q01085 375 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 MGAT5BQ3V5L5 792 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 C8orf82Q6P1X6 216 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PIM3Q86V86 326 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 CIR1Q86X95 450 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 LGI2Q8N0V4 545 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PCYOX1LQ8NBM8 494 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 GLT1D1Q96MS3 346 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 GCNAQ96QF7 691 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 CYP2S1Q96SQ9 504 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TTLL2Q9BWV7 592 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ARL5AQ9Y689 179 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TMEM88BA6NKF7 163 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 MAP3K13O43283 966 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 TBC1D4O60343 1298 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ACSL4O60488 711 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 DNAJA2O60884 412 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 VPS4BO75351 444 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ALDH1A1P00352 501 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PMLP29590 882 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ATP6V0D1P61421 351 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 GNA12Q03113 381 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 PPP1R3AQ16821 1122 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 ABI1Q8IZP0 508 aa21.96■■□□□ 1.11
SMARCD2-201ENST00000225742 GALNT15Q8N3T1 639 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms