RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 HBS1LQ9Y450 684 aaKnown RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 LYPLA1O75608 230 aaPredicted RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 FBXO48Q5FWF7 155 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 CHST15Q7LFX5 561 aaPredicted RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 WDR36Q8NI36 951 aaKnown RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 HEPHQ9BQS7 1158 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 MECRQ9BV79 373 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 SGK2Q9HBY8 427 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 GKN1Q9NS71 199 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 OSER1Q9NX31 292 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TBC1D30Q9Y2I9 924 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 ZNF780BQ9Y6R6 833 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 SLC28A1O00337 649 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 PRAMEF1O95521 474 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TIE1P35590 1138 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 SAMD4BQ5PRF9 694 aaKnown RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 DNAJB7Q7Z6W7 309 aaPredicted RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 SCAIQ8N9R8 606 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 LMLNQ96KR4 655 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TTLL2Q9BWV7 592 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 MAF1Q9H063 256 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 ADAMTS3O15072 1205 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 GDI1P31150 447 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TRMT5Q32P41 509 aaKnown RBP18.46■□□□□ 0.55
CLIP2-201ENST00000223398 CNKSR3Q6P9H4 555 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 HID1Q8IV36 788 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 C10orf107Q8IVU9 208 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 CLHC1Q8NHS4 586 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 TBATAQ96M53 351 aa18.46■□□□□ 0.55
CLIP2-201ENST00000223398 PCYT1AP49585 367 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 DEFA1P59665 94 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 DEFA3P59666 94 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 SRSF11Q05519 484 aaKnown RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 CAPN13Q6MZZ7 669 aaPredicted RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 TAPT1Q6NXT6 567 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 OR6Y1Q8NGX8 325 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 HMGB4Q8WW32 186 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 SIKE1Q9BRV8 207 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 MCMBPQ9BTE3 642 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 ATG10Q9H0Y0 220 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 DCLRE1BQ9H816 532 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 ERVK-5Q9HDB9 667 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 A0A1W2PQ45 241 aaPredicted RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 A0A1W2PQY0 241 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 POP4O95707 220 aaKnown RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 IFNGR2P38484 337 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 YBEYP58557 167 aaPredicted RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 FAM129CQ86XR2 697 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 PLD4Q96BZ4 506 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 ST6GALNAC4Q9H4F1 302 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 POLMQ9NP87 494 aaPredicted RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 MYOM1P52179 1685 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 MT-CYBP00156 380 aaPredicted RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 BST1Q10588 318 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 CTU1Q7Z7A3 348 aaKnown RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 SCN2BO60939 215 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 EPHA3P29320 983 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 ADSSP30520 456 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 ILF3Q12906 894 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 CLP1Q92989 425 aaKnown RBP18.45■□□□□ 0.54
CLIP2-201ENST00000223398 REEP1Q9H902 201 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 HMGXB4Q9UGU5 601 aa18.45■□□□□ 0.54
CLIP2-201ENST00000223398 FKBP6O75344 327 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PKMP14618 531 aaKnown RBP18.44■□□□□ 0.54
CLIP2-201ENST00000223398 SOX6P35712 828 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PRR23BQ6ZRT6 265 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 HDDC3Q8N4P3 179 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 MINDY3Q9H8M7 445 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 TMEM216Q9P0N5 145 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PCDHGC3Q9UN70 934 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 DGKEP52429 567 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 HECTD2Q5U5R9 776 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 TXNDC11Q6PKC3 985 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ZBTB2Q8N680 514 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PANX1Q96RD7 426 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 EQTNQ9NQ60 294 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 POLR3HQ9Y535 204 aaPredicted RBP18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ATRNL1Q5VV63 1379 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 C15orf38-AP3S2A0A0A6YYH1 394 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 AZIN1O14977 448 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 FAM155BO75949 473 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 DUPD1Q68J44 220 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ARPINQ7Z6K5 226 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 GDPD5Q8WTR4 605 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 HEXDCQ8WVB3 486 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 IL12RB2Q99665 862 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 KCNK4Q9NYG8 393 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
CLIP2-201ENST00000223398 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 A0A1W2PPM1 405 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 RHPN2P1A8MT19 583 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 FAM25AB3EWG3 89 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 FAM25CB3EWG5 89 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 FAM25GB3EWG6 89 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 INSIG1O15503 277 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms