RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GRB14Q14449 540 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 TSNQ15631 228 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CLVS1Q8IUQ0 354 aaPredicted RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CDYL2Q8N8U2 506 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 MTFMTQ96DP5 389 aaKnown RBP15.1■□□□□ 0.01
EFNB1-201ENST00000204961 CDH9Q9ULB4 789 aa15.1■□□□□ 0.01
EFNB1-201ENST00000204961 AGRPO00253 132 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TRIM38O00635 465 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 MUSKO15146 869 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 OXTRP30559 389 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TRIM25Q14258 630 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 SEMA3AQ14563 771 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 KCTD21Q4G0X4 260 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 INTS6LQ5JSJ4 861 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 SIRPB2Q5JXA9 342 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TSPAN14Q8NG11 270 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 KCTD13Q8WZ19 329 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 EXD2Q9NVH0 621 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 AFF4Q9UHB7 1163 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CCDC162PA2VCL2 907 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TRPC5OSA6NMA1 111 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TBX4P57082 545 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 OR4D1Q15615 310 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CYP51A1Q16850 503 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 C6orf10Q5SRN2 563 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 PAQR3Q6TCH7 311 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TEX37Q96LM6 180 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CBX4O00257 560 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 FFAR3O14843 346 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 VILLO15195 856 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 GPR42O15529 346 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 ELNP15502 786 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 RPL5P46777 297 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 UPP1Q16831 310 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 UGT3A1Q6NUS8 523 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 PPM1MQ96MI6 270 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 SIKE1Q9BRV8 207 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 TBCDQ9BTW9 1192 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CCDC68Q9H2F9 335 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 STN1Q9H668 368 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CCSER2Q9H7U1 834 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CIDEBQ9UHD4 219 aa15.09■□□□□ 0.01
EFNB1-201ENST00000204961 CNOT6Q9ULM6 557 aaKnown RBP15.09■□□□□ 0.01
EFNB1-201ENST00000204961 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0.01
EFNB1-201ENST00000204961 BTN3A1O00481 513 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 MTSS1O43312 755 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 EEF1DP29692 281 aaKnown RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 CPT1AP50416 773 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 RPS24P62847 133 aaKnown RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 COL9A2Q14055 689 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 POLD3Q15054 466 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 ZRANB3Q5FWF4 1079 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 STXBP5Q5T5C0 1151 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 CYS1Q717R9 158 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 UTS2BQ765I0 119 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 THEM5Q8N1Q8 247 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 SHCBP1Q8NEM2 672 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 OR13J1Q8NGT2 312 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 CLHC1Q8NHS4 586 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 NTAN1Q96AB6 310 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 C19orf60Q96EN9 201 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 HSPBAP1Q96EW2 488 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 RNF11Q9Y3C5 154 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 NPEPPSL1A6NEC2 478 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 ATP6V1G1O75348 118 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 ALOX15P16050 662 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 TPP2P29144 1249 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 IST1P53990 364 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 MAP2K5Q13163 448 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 STX5Q13190 355 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 FBXL22Q6P050 247 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 LPCAT2Q7L5N7 544 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 PIWIL4Q7Z3Z4 852 aaKnown RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 OR4K2Q8NGD2 314 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 PARK7Q99497 189 aaKnown RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 SYT17Q9BSW7 474 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 SLC38A7Q9NVC3 462 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 C6orf203Q9P0P8 240 aaPredicted RBP15.08■□□□□ 0
EFNB1-201ENST00000204961 RNF112Q9ULX5 631 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 DNAJC15Q9Y5T4 150 aa15.08■□□□□ 0
EFNB1-201ENST00000204961 MBLAC1A4D2B0 266 aaPredicted RBP15.07■□□□□ 0
EFNB1-201ENST00000204961 ASLP04424 464 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 NDST2P52849 883 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 PURAQ00577 322 aaKnown RBP15.07■□□□□ 0
EFNB1-201ENST00000204961 PIGFQ07326 219 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 NAB1Q13506 487 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 TECRLQ5HYJ1 363 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 LDLRAP1Q5SW96 308 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 METTL21CQ5VZV1 264 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 TTC33Q6PID6 262 aaPredicted RBP15.07■□□□□ 0
EFNB1-201ENST00000204961 FBXO32Q969P5 355 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 APOL5Q9BWW9 433 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
EFNB1-201ENST00000204961 SPAG4Q9NPE6 437 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 GKN1Q9NS71 199 aa15.07■□□□□ 0
EFNB1-201ENST00000204961 NIPSNAP2O75323 286 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms