RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 SmoP56726 793 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Clec4b1Q7TS58 209 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Adam32Q8K410 754 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Arpc2Q9CVB6 300 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ly6kQ9CWP4 154 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cdyl2Q9D5D8 503 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nt5cQ9JM14 200 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rbck1Q9WUB0 508 aa15.92■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pcna-ps2A0A140T8V5 261 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mroh7A2AVR2 1279 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfr310B2RVZ1 332 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm1141B9EJU1 475 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fam47eD3YWC7 402 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sdc4O35988 198 aaKnown RBP15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 PcnaP17918 261 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 RcvrnP34057 202 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pdha1P35486 390 aaKnown RBP15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rpl36P47964 105 aaKnown RBP15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 IdsQ08890 552 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Brsk1Q5RJI5 778 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lemd2Q6DVA0 511 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ggnbp1Q6K1E7 370 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Clec1bQ9JL99 229 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pld1Q9Z280 1074 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Speer3W4VSP1 261 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 PolP11369 1281 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ccdc127Q3TC33 260 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm853Q3UNZ2 425 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Luc7l3Q5SUF2 432 aaKnown RBP15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 PhgdhQ61753 533 aaKnown RBP15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 RgnQ64374 299 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm7247Q6UY52 187 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Naa25Q8BWZ3 972 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 ItchQ8C863 864 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nrif1Q923B3 828 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 S100pbpQ9D5K4 396 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rasgrp2Q9QUG9 608 aa15.91■□□□□ 0.14
Trim39-203ENSMUST00000113706 JundP15066 341 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Npr1P18293 1057 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Yap1P46938 488 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cyp2a12P56593 492 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mtf2Q02395 593 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Slfn4Q3UV66 602 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 LpoQ5SW46 710 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 StyxQ60969 223 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ssxb3Q6XAS4 170 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lancl3Q8CD19 420 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mul1Q8VCM5 352 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dlg2Q91XM9 852 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Vps28Q9D1C8 221 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Trim42Q9D2H5 723 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Smok3cA0A087WSF2 504 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Psmc3O88685 442 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gas2P11862 314 aaKnown RBP15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Casp2P29594 452 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 CskP41241 450 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lrrn4clQ3TYX2 239 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Hepacam2Q4VAH7 463 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lrrc27Q80YS5 523 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Kirrel3Q8BR86 778 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 TwnkQ8CIW5 685 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cog4Q8R1U1 785 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pbx4Q99NE9 378 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lrrc40Q9CRC8 602 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rrp15Q9CYX7 281 aaKnown RBP15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pik3cgQ9JHG7 1102 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 PikfyveQ9Z1T6 2097 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fam166bA2AIP0 273 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ift81O35594 676 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 AldoaP05064 364 aaKnown RBP15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tead2P48301 445 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Myo1gQ5SUA5 1024 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nfe2l1Q61985 741 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 C1qtnf6Q6IR41 264 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cyp2d40Q6P8N9 338 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gabra5Q8BHJ7 463 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dyrk4Q8BI55 632 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pcyox1lQ8C7K6 495 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Themis3Q9CU24 569 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 CenpsQ9D084 142 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gpr45Q9EQQ4 373 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Clcn5Q9WVD4 746 aa15.9■□□□□ 0.14
Trim39-203ENSMUST00000113706 Myo10F8VQB6 2062 aa15.89■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gp1baO35930 734 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Fzd1O70421 642 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Adra2bP30545 450 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Plk2P53351 682 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 ErgP81270 486 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 VegfcP97953 415 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gpr174Q3U507 335 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ccdc160Q3UYG1 323 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Bdkrb1Q61125 334 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Q8CIL4 281 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 XpotQ9CRT8 963 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Fcf1Q9CTH6 198 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Ndst3Q9EQH7 873 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Pias4Q9JM05 507 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Dach1Q9QYB2 751 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Cyb561d2Q9WUE3 222 aa15.89■□□□□ 0.13
Trim39-203ENSMUST00000113706 Gria4Q9Z2W8 902 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 55.2 ms