RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 4930558K02RikE0CXC6 182 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 B3gntl1Q3U129 357 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ampd1Q3V1D3 745 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Eif2dQ61211 570 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 H2-Q4Q8HWB2 354 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Acsl5Q8JZR0 683 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fnbp1lQ8K012 605 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fis1Q9CQ92 152 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Chrac1Q9JKP8 129 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Arid3bQ9Z1N7 568 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 UprtB1AVZ0 310 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Prkag1O54950 330 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cyp2b19O55071 492 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hmox2O70252 315 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 MaptP10637 733 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Il1rnP25085 178 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PrkczQ02956 592 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hdgfl2Q3UMU9 669 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rap1gap2Q5SVL6 712 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Aldh1a2Q62148 518 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rmdn2Q8BSE0 410 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gpat3Q8C0N2 438 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Oit3Q8R4V5 546 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 CtcflA2APF3 636 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm4450E9Q007 373 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Hsd3b4Q61767 373 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr798Q7TRH8 311 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zfp719Q8BIV1 735 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zswim3Q8CFL8 695 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Klrb1fQ8VD98 217 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Retreg1dQ8VE91 480 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fig4Q91WF7 907 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Prpf19Q99KP6 504 aaKnown RBP15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr706Q9EPF8 316 aa15.57■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Nup98Q6PFD9 1816 aaKnown RBP15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm14401A2ARV7 303 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm17093F6XGJ4 214 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ctps1P70698 591 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Meaf6Q2VPQ9 191 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Znf185Q62394 352 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rad54bQ6PFE3 886 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fbxo9Q8BK06 437 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fzd10Q8BKG4 582 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Smoc1Q8BLY1 463 aaKnown RBP15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mul1Q8VCM5 352 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fbxo33Q8VE08 562 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tomm20lQ9D4V6 152 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tle6Q9WVB3 581 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Grip2G3XA20 1042 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm10721J3QPJ9 223 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 ItgavP43406 1044 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Scube1Q6NZL8 1018 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rasa4Q6PFQ7 802 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Klhl17Q6TDP3 640 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tyw1Q8BJM7 721 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 UstQ8BUB6 407 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Acsm2Q8K0L3 575 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zfp617Q91WM0 559 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Mrgpra2Q91WW4 305 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 QpctQ9CYK2 362 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 5530400C23RikQ9D3I0 173 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 PirQ9D711 290 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dus2Q9D7B1 493 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rpl9-ps6A0A140T8T4 192 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Acp4D3YTS9 425 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rpl9P51410 192 aaKnown RBP15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Dlg3P70175 849 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Atp5jP97450 108 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Prickle1Q3U5C7 832 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Serpina3gQ5I2A0 440 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zswim9Q6DI92 447 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Rexo4Q6PAQ4 432 aaKnown RBP15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr533Q7TRT7 320 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pqlc1Q80XM9 271 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cdhr5Q8VHF2 831 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Eif4e3Q9DBB5 207 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Fam46dB1ATX6 390 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Sema6aO35464 1031 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Cd4P06332 457 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Lamp2P17047 415 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 BrafP28028 804 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gm4951Q3UED7 406 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Magee2Q52KG3 523 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Trpv1Q704Y3 839 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Tas2r129Q7M709 320 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Pcdhb10Q91VE5 797 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 TfQ921I1 697 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Spg21Q9CQC8 308 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Orc6Q9WUJ8 262 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Gipc2Q9Z2H7 314 aa15.56■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Vmn2r73D3Z7M3 851 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Got2P05202 430 aaKnown RBP15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 FlgP11088 336 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Atp6v0d1P51863 351 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Arhgap20Q6IFT4 1182 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Ccdc17Q8CE13 565 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Olfr449Q8VGW8 311 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Zfp623Q9CY99 499 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Agpat3Q9D517 376 aa15.55■□□□□ 0.08
Ccdc88b-201ENSMUST00000113440 Krt83E9Q1Y9 479 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms