RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Wwp1Q8BZZ3 918 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Scara3Q8C850 606 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lsm14aQ8K2F8 462 aaKnown RBP10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Prrg2Q8R182 198 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mtg1Q8R2R6 326 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Smim14Q91VT8 99 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Snx15Q91WE1 337 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lrrc17Q9CXD9 443 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 VasnQ9CZT5 673 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Neurl2Q9D0S4 285 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cldn22Q9D7U6 220 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 P2yr13Q9D8I2 337 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Stk19Q9JHN8 254 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Map2k5Q9WVS7 448 aa10.9□□□□□ -0.67
Msh3-201ENSMUST00000022220 Chd5A2A8L1 1946 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Plch1Q4KWH5 1682 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ccdc120A2AEV7 629 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 DgkdE9PUQ8 1220 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 ClockO08785 855 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Kcnn4O89109 425 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Dpy19l2P0CW70 773 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 TecP24604 630 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Jak1P52332 1153 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 NadkP58058 439 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm4951Q3UED7 406 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp560Q3URI6 754 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gdpd5Q640M6 607 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ssxb3Q6XAS4 170 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr814Q7TRH4 310 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fut11Q8BHC9 489 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Kctd12bQ8C7J6 292 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Amer2Q8CCJ4 672 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rdh13Q8CEE7 334 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pcdhb18Q91Y02 792 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mrpl9Q99N94 265 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mfsd10Q9D2V8 456 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 GmprQ9DCZ1 345 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Asb1Q9WV74 336 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cep295Q8BQ48 2412 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vmn2r70K7N702 854 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vmn2r44L7N2E1 861 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Irs1P35569 1233 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pax7P47239 503 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 EdnrbP48302 442 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 GuloP58710 440 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pou2f2Q00196 463 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 CamkvQ3UHL1 512 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Adora2bQ60614 332 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mapk10Q61831 464 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Sfrp1Q8C4U3 314 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Spag16Q8K450 639 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 SarafQ8R3Q0 334 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1414Q8VGU5 312 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Usb1Q91W78 267 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Wrnip1Q91XU0 660 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 MydgfQ9CPT4 166 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ola1Q9CZ30 396 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp655Q9CZP3 541 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hormad1Q9D5T7 392 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm5538W4VSP6 401 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm45713A0A1B0GS68 446 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tubb1A2AQ07 451 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Catsperg2C6KI89 1145 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Acp4D3YTS9 425 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vmn2r11E9Q4X4 861 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm7073E9QAS1 335 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp946F6VWU8 523 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ctnnd2O35927 1247 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gabpb1Q00420 383 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ptchd3Q0EEE2 906 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Plpp4Q0VBU9 271 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Elf3Q3UPW2 391 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fbxw11Q5SRY7 542 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mfsd3Q5U419 412 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fcrl5Q68SN8 596 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Podnl1Q6P3Y9 559 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Adam39Q7M762 756 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Clec4b1Q7TS58 209 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Arhgap25Q8BYW1 648 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tp53bp2Q8CG79 1128 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rem2Q8VEL9 341 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rnh1Q91VI7 456 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tnip2Q99JG7 430 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Prpf19Q99KP6 504 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pex6Q99LC9 981 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tex13bQ99MW5 186 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Duoxa2Q9D311 320 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ppp1r2Q9DCL8 206 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ddx21Q9JIK5 851 aaKnown RBP10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mbtps1Q9WTZ2 1052 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ern2Q9Z2E3 911 aa10.89□□□□□ -0.67
Msh3-201ENSMUST00000022220 6720489N17RikA0A1Y7VJW0 127 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 RerglB2RVE2 204 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 F6Y6L6 278 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Abhd12bG3UZN6 359 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpatch4Q3TFK5 415 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Srbd1Q497V5 1015 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pla2g4dQ50L43 825 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Wee2Q66JT0 555 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cdc14bQ6PFY9 485 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms