RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Klrb1bP27812 223 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 RxraP28700 467 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 SirpaP97797 513 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gpr174Q3U507 335 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pramel7Q810Y8 479 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tmc7Q8C428 726 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mbtps2Q8CHX6 515 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mterf1aQ8CHZ9 379 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mrpl47Q8K2Y7 252 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 LiasQ99M04 373 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Atad1Q9D5T0 361 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lrrc46Q9DAP0 323 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 St6galnac1Q9QZ39 526 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mbtps1Q9WTZ2 1052 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Casp8ap2Q9WUF3 1962 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Vmn2r5K7N788 911 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Atn1O35126 1175 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Kiaa1841Q68FF0 718 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Prrt3Q6PE13 971 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Znf423Q80TS5 1292 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sfr1Q8BP27 319 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Prkaa2Q8BRK8 552 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ccdc32Q8BS39 179 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Arhgef33Q8BW86 850 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rem2Q8VEL9 341 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 CtsqQ91ZF4 343 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Prmt3Q922H1 532 aa16.25■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm14401A2ARV7 303 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Phf11cB4XVP9 339 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tmem233D3Z1U7 110 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm44G3UW88 330 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rhox2gL7MUB9 191 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mup13L7N222 235 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dpysl2O08553 572 aaKnown RBP16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Uba1Q02053 1058 aaKnown RBP16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Smpd1Q04519 627 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Eml1Q05BC3 814 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Q32M26 199 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sppl2bQ3TD49 578 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fbxw11Q5SRY7 542 aaKnown RBP16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Plekha4Q8VC98 588 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 OptcQ920A0 328 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ifi30Q9ESY9 248 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Il17rbQ9JIP3 499 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm43518A0A0G2JGB6 165 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ttll8A4Q9F1 832 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Akap5D3YVF0 745 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Clec2lP0C7M9 211 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Serpinb2P12388 415 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sipa1P46062 1037 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Defa8P50706 81 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Afg1lQ3V384 480 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nr2c1Q505F1 590 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mef2aQ60929 498 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ifi47Q61635 420 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 AtminQ6P9S1 818 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tas2r106Q7M724 308 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Snx32Q80ZJ7 404 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cyp2c70Q91W64 489 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc5a2Q923I7 670 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Prpsap1Q9D0M1 356 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dlgap1Q9D415 992 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 SgshQ9EQ08 502 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cdkl2Q9QUK0 568 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Myo10F8VQB6 2062 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Znf711A2ANX9 761 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pdzd7E9Q9W7 1021 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm2832F7AEC7 200 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 H2-Eb1P04230 264 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc2a4P14142 509 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mthfd2P18155 350 aaKnown RBP16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Hmx2P43687 273 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pim3P58750 326 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Clec4fP70194 548 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zfp90Q61967 636 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nacc1Q7TSZ8 514 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cnpy4Q8BQ47 245 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fam83aQ8K2P2 436 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Them5Q9CQJ0 248 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cpxm2Q9D2L5 764 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Znhit2Q9QY66 399 aa16.24■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr625-ps1A0A140T8L4 321 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Aff2O55112 1272 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pou4f1P17208 421 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Csf3rP40223 837 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Foxk1P42128 719 aaKnown RBP16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tmem102Q3UPR7 509 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zfp658Q5PPQ4 887 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Adora2bQ60614 332 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Il15raQ60819 263 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tbc1d12Q6A039 696 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Arl5aQ80ZU0 179 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fmo9Q8C116 539 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Klrb1fQ8VD98 217 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr617Q8VGA1 318 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Usb1Q91W78 267 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tnip2Q99JG7 430 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Il23aQ9EQ14 196 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Trpc4apQ9JLV2 797 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ptk2bQ9QVP9 1009 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms