RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 TAB3Q8N5C8 712 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 ARL14EPQ8N8R7 260 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 MAB21L3Q8N8X9 362 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 SPOCK2Q92563 424 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 GRAMD1AQ96CP6 724 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 C2orf49Q9BVC5 232 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 KCNK9Q9NPC2 374 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 THG1LQ9NWX6 298 aaKnown RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 KIAA1522Q9P206 1035 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-234ENST00000642041 INVSQ9Y283 1065 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 CPQQ9Y646 472 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 RPS6KL1Q9Y6S9 549 aa17.33■□□□□ 0.36
PHGDH-234ENST00000642041 CNTN5O94779 1100 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 PEX11BO96011 259 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 MGAT1P26572 445 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 SPRP35270 261 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-234ENST00000642041 CCT5P48643 541 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 DHPSP49366 369 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-234ENST00000642041 ATP1A2P50993 1020 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 CSE1LP55060 971 aaKnown RBP17.32■□□□□ 0.36
PHGDH-234ENST00000642041 ITKQ08881 620 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 SPARCL1Q14515 664 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 DMC1Q14565 340 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 SKIDA1Q1XH10 827 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 OR52K1Q8NGK4 314 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 DCAKDQ8WVC6 231 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 CHFRQ96EP1 664 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 CERS2Q96G23 380 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 FEM1CQ96JP0 617 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
PHGDH-234ENST00000642041 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 MKS1Q9NXB0 559 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 GGA2Q9UJY4 613 aa17.32■□□□□ 0.36
PHGDH-234ENST00000642041 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 TIMM44O43615 452 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 AVILO75366 819 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 FGF1P05230 155 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 ENGP17813 658 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 SLC6A4P31645 630 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 ADRA1AP35348 466 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 GP5P40197 560 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 PLK1P53350 603 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 RUNX3Q13761 415 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 CRYMQ14894 314 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 FYB2Q5VWT5 728 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 KIAA0408Q6ZU52 694 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 SRRM1Q8IYB3 904 aaKnown RBP17.31■□□□□ 0.36
PHGDH-234ENST00000642041 CMTM8Q8IZV2 173 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 PPM1NQ8N819 430 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 RPLP0P6Q8NHW5 317 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 TADA1Q96BN2 335 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 IFT43Q96FT9 208 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 MGME1Q9BQP7 344 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 MLPHQ9BV36 600 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-234ENST00000642041 CINPQ9BW66 212 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-234ENST00000642041 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
PHGDH-234ENST00000642041 GKN1Q9NS71 199 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 TBK1Q9UHD2 729 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 RAXQ9Y2V3 346 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 TTLL3Q9Y4R7 772 aa17.31■□□□□ 0.36
PHGDH-234ENST00000642041 DENND4CQ5VZ89 1909 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 PLXNB3Q9ULL4 1909 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 A0A1W2PQ67 120 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 TMEM120BA0PK00 339 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 TK2O00142 265 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 PRAMEF12O95522 483 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 FAM107AO95990 144 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 KLKB1P03952 638 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 IRF1P10914 325 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 CHN1P15882 459 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 BCKDHBP21953 392 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 GCAP28676 217 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 CSNK1DP48730 415 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 SERPINH1P50454 418 aaKnown RBP17.3■□□□□ 0.36
PHGDH-234ENST00000642041 GAD2Q05329 585 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 SULT2A1Q06520 285 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 CDH18Q13634 790 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 INSCQ1MX18 579 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 ANKRD20A4Q4UJ75 823 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 HP1BP3Q5SSJ5 553 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-234ENST00000642041 ZNF771Q7L3S4 317 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-234ENST00000642041 GALNT7Q86SF2 657 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 IGDCC3Q8IVU1 814 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 TP53INP2Q8IXH6 220 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 HDDC3Q8N4P3 179 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 CCDC33Q8N5R6 958 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 DCAF4L2Q8NA75 395 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 ZFRQ96KR1 1074 aaKnown RBP17.3■□□□□ 0.36
PHGDH-234ENST00000642041 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 FAM167BQ9BTA0 163 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 SLC2A11Q9BYW1 496 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 FAM107BQ9H098 131 aa17.3■□□□□ 0.36
PHGDH-234ENST00000642041 MUC3BQ9H195 1237 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms