RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PIH1D1Q9NWS0 290 aaKnown RBP13□□□□□ -0.33
PHGDH-218ENST00000641491 KCTD5Q9NXV2 234 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 B4GALT6Q9UBX8 382 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 DMGDHQ9UI17 866 aaKnown RBP13□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF711Q9Y462 761 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 DCHS1Q96JQ0 3298 aa13□□□□□ -0.33
PHGDH-218ENST00000641491 GVINP1Q7Z2Y8 2422 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 A8MX80 341 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PFDN6O15212 129 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 POLBP06746 335 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ALPIP09923 528 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PIRTP0C851 137 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 TIMP2P16035 220 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 TPH1P17752 444 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ADRA1DP25100 572 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 MGAT1P26572 445 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 CD6P30203 668 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PHBP35232 272 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ADRA1AP35348 466 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 HADHAP40939 763 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 CHRNA4P43681 627 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 TPMTP51580 245 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 RPS21P63220 83 aaKnown RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PRAMEP78395 509 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 TAF1AQ15573 450 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 KCTD19Q17RG1 926 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 SKIDA1Q1XH10 827 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ZNF284Q2VY69 593 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 PCID2Q5JVF3 399 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ARMC3Q5W041 872 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 RANBP10Q6VN20 620 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 DPPA4Q7L190 304 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 DTWD2Q8NBA8 298 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 FBXO25Q8TCJ0 367 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 BRSK1Q8TDC3 778 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 SNX19Q92543 992 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 TADA1Q96BN2 335 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 STAMBPL1Q96FJ0 436 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 WRAP53Q9BUR4 548 aaKnown RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 GDF3Q9NR23 364 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 NFU1Q9UMS0 254 aa12.99□□□□□ -0.33
PHGDH-218ENST00000641491 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
PHGDH-218ENST00000641491 F5P12259 2224 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TCRBV7S3A2A0A539 114 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 MEI4A8MW99 385 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PI15O43692 258 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 AP1G1O43747 822 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 FZD6O60353 706 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 SEMA4FO95754 770 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TTC4O95801 387 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PRKCGP05129 697 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 ATXN1LP0C7T5 689 aaKnown RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PGAM1P18669 254 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 HNF1BP35680 557 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 FZD5Q13467 585 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 OLIG2Q13516 323 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 GAS6Q14393 721 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 ELF2Q15723 593 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 LRRC66Q68CR7 880 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 CEP68Q76N32 757 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 EIF1ADQ8N9N8 165 aaKnown RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 OR2T34Q8NGX1 318 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PIH1D2Q8WWB5 315 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TTC25Q96NG3 672 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TRIB3Q96RU7 358 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TTC1Q99614 292 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 GORASP1Q9BQQ3 440 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PHACTR1Q9C0D0 580 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 ARNT2Q9HBZ2 717 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 ZC3H7BQ9UGR2 993 aaKnown RBP12.98□□□□□ -0.33
PHGDH-218ENST00000641491 EBF1Q9UH73 591 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 TCAF1Q9Y4C2 921 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 CHD5Q8TDI0 1954 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 DMDP11532 3685 aa12.98□□□□□ -0.33
PHGDH-218ENST00000641491 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 PSMD11O00231 422 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 PLK4O00444 970 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 PLRG1O43660 514 aaKnown RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 TM7SF2O76062 418 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 FSBPO95073 299 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 TNFRSF8P28908 595 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 PPARGP37231 505 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 MMP12P39900 470 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 CARSP49589 748 aaKnown RBP12.97□□□□□ -0.33
PHGDH-218ENST00000641491 LIG3P49916 1009 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 ADPRHP54922 357 aa12.97□□□□□ -0.33
PHGDH-218ENST00000641491 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms