RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TTC7BQ86TV6 843 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM135Q86UB9 458 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 C17orf82Q86X59 251 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 RYBPQ8N488 228 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-212ENST00000641247 BMPERQ8N8U9 685 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 PLA2G15Q8NCC3 412 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 GALNT11Q8NCW6 608 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 MNS1Q8NEH6 495 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 STK32AQ8WU08 396 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TCTN2Q96GX1 697 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ERGIC2Q96RQ1 377 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 CTRCQ99895 268 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 TKTL2Q9H0I9 626 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 FGF22Q9HCT0 170 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 PIGVQ9NUD9 493 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 NDFIP2Q9NV92 336 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 ARHGEF38Q9NXL2 777 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 VPS4AQ9UN37 437 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■□□□□ 10.9
PHGDH-212ENST00000641247 ST14Q9Y5Y6 855 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 KCNMB2Q9Y691 235 aa9.78□□□□□ -0.84
PHGDH-212ENST00000641247 DOPEY1Q5JWR5 2465 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 IGLV3-10A0A075B6K4 115 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 EFCAB7A8K855 629 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 KRIT1O00522 736 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 TOR1BO14657 336 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 HGSO14964 777 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 STX10O60499 249 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 SLU7O95391 586 aaKnown RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 TNFP01375 233 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 FUCA1P04066 466 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 FGF1P05230 155 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 PRF1P14222 555 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 CSF2RBP32927 897 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 LIMK2P53671 638 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 MRPL49Q13405 166 aaKnown RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 TRIM14Q14142 442 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 TCTN3Q6NUS6 607 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ASB18Q6ZVZ8 466 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 MAMDC2Q7Z304 686 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 NRROSQ86YC3 692 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 PPM1KQ8N3J5 372 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 CPT1CQ8TCG5 803 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 PATE1Q8WXA2 126 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ZNF606Q8WXB4 792 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 RTP4Q96DX8 246 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ZNF830Q96NB3 372 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 CPXM1Q96SM3 734 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 DDA1Q9BW61 102 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 DPEP2Q9H4A9 486 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 GPN2Q9H9Y4 310 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ATP13A1Q9HD20 1204 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 APMAPQ9HDC9 416 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 CASS4Q9NQ75 786 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 PRDM8Q9NQV8 689 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 SLC39A1Q9NY26 324 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 KLQ9UEF7 1012 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 DGKBQ9Y6T7 804 aa9.77□□□□□ -0.85
PHGDH-212ENST00000641247 ILVBLA1L0T0 632 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PPM1DO15297 605 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 INSIG1O15503 277 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 THRAP10827 490 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 OR1E1P30953 314 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 FMO5P49326 533 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PDCLQ13371 301 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 NR1D2Q14995 579 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 LRRC14Q15048 493 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 MYLK3Q32MK0 819 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 NADK2Q4G0N4 442 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 TMEM52BQ4KMG9 183 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PRR30Q53SZ7 412 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-212ENST00000641247 RETSATQ6NUM9 610 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 FAM183BPQ6ZVS7 135 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 ZNF438Q7Z4V0 828 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 HEATR4Q86WZ0 1026 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 LRRC8AQ8IWT6 810 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 NLGN4XQ8N0W4 816 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PELI3Q8N2H9 469 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 NLGN4YQ8NFZ3 816 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-212ENST00000641247 CXorf40AQ8TE69 158 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
PHGDH-212ENST00000641247 STARD8Q92502 1023 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 IQCDQ96DY2 449 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 WDR92Q96MX6 357 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 NT5C1BQ96P26 610 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 LGR4Q9BXB1 951 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 MAGEB5Q9BZ81 275 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-212ENST00000641247 PSD3Q9NYI0 1048 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 ERRFI1Q9UJM3 462 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-212ENST00000641247 TLK1Q9UKI8 766 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 CNTN6Q9UQ52 1028 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 MAP4K5Q9Y4K4 846 aa9.76□□□□□ -0.85
PHGDH-212ENST00000641247 TMEM110-MUSTN1A8MSY1 372 aa9.75□□□□□ -0.85
PHGDH-212ENST00000641247 TCP11X1B4DZS4 312 aa9.75□□□□□ -0.85
PHGDH-212ENST00000641247 AKR1B15C9JRZ8 316 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms