RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 IMP3Q9NV31 184 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 GDAP2Q9NXN4 497 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 NDRG2Q9UN36 371 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 HEBP2Q9Y5Z4 205 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 H3BNH8 94 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 IPO13O94829 963 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 AP2A1O95782 977 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 MT-CO1P00395 513 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 PBX1P40424 430 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 TBL3Q12788 808 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 GPR17Q13304 367 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 DYNC1I2Q13409 638 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 LAPTM5Q13571 262 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 LRRC32Q14392 662 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 ADGRF1Q5T601 910 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 TAPT1Q6NXT6 567 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 MPP5Q8N3R9 675 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 VMP1Q96GC9 406 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 DCLRE1BQ9H816 532 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 C10orf88Q9H8K7 445 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 SAR1AQ9NR31 198 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 MRPL42Q9Y6G3 142 aaKnown RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 C10orf71Q711Q0 1435 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 WDR47O94967 919 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 POU1F1P28069 291 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 RFWD3Q6PCD5 774 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 TMC5Q6UXY8 1006 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 OR4K2Q8NGD2 314 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 PCBD2Q9H0N5 130 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 GULP1Q9UBP9 304 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 LEF1Q9UJU2 399 aaPredicted RBP11.05□□□□□ -0.64
SCN1B-208ENST00000640135 RAP2CQ9Y3L5 183 aa11.05□□□□□ -0.64
SCN1B-208ENST00000640135 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ADGRA3Q8IWK6 1321 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 FCHO1O14526 889 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 PIRTP0C851 137 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ME2P23368 584 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 BLVRAP53004 296 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 HADHBP55084 474 aaKnown RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 NUP107P57740 925 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 UBXN2BQ14CS0 331 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 KIF2BQ8N4N8 673 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TSTD1Q8NFU3 115 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 IRF7Q92985 503 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 OTUB2Q96DC9 234 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ELOVL2Q9NXB9 296 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 INVSQ9Y283 1065 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 PCDHGB3Q9Y5G1 929 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 COL2A1P02458 1487 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 FAM237BA0A1B0GVD1 139 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 MAN1A2O60476 641 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ATG7O95352 703 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 SNAI1O95863 264 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 SOD2P04179 222 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 RPL17P18621 184 aaKnown RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 MAGEA11P43364 429 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 JAM2P57087 298 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 CCDC85BQ15834 202 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 SOWAHAQ2M3V2 549 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 CNSTQ6PJW8 725 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TMEM26Q6ZUK4 368 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TRPC4APQ8TEL6 797 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ZNF780BQ9Y6R6 833 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 DYTNA2CJ06 578 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 PDE9AO76083 593 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 LDLRP01130 860 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 NUDT17P0C025 328 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 IRX1P78414 480 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TRAF2Q12933 501 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 BIKQ13323 160 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 SQLEQ14534 574 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TBCELQ5QJ74 424 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 VITQ6UXI7 678 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 CASP12Q6UXS9 341 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 DEFB107AQ8IZN7 70 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 OR10G6Q8NH81 332 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ZNF461Q8TAF7 563 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 OVCA2Q8WZ82 227 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 FIG4Q92562 907 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 CENPTQ96BT3 561 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 FBXL18Q96ME1 805 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ANGPT4Q9Y264 503 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 ILVBLA1L0T0 632 aa11.04□□□□□ -0.64
SCN1B-208ENST00000640135 TRAFD1O14545 582 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 PAPSS1O43252 624 aaPredicted RBP11.04□□□□□ -0.64
SCN1B-208ENST00000640135 NQO1P15559 274 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms