RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 CD247P20963 164 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 KCNA5P22460 613 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 GARSP41250 739 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 GPLD1P80108 840 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 BLMHQ13867 455 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 PRKD1Q15139 912 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 KCTD19Q17RG1 926 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 ERCC6LQ2NKX8 1250 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 MPPE1Q53F39 396 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 GLE1Q53GS7 698 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 TANGO2Q6ICL3 276 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 B4GALNT4Q76KP1 1039 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 MTDHQ86UE4 582 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 MCATQ8IVS2 390 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 CAMKK1Q8N5S9 505 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 ALLCQ8N6M5 410 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 LSMEM1Q8N8F7 131 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 BPIFB1Q8TDL5 484 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 GRK7Q8WTQ7 553 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 HDAC11Q96DB2 347 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 C1GALT1C1Q96EU7 318 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 CCDC114Q96M63 670 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 LGMNQ99538 433 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 SLC39A8Q9C0K1 460 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 LINC00597Q9H2U6 94 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 USP29Q9HBJ7 922 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 GPAMQ9HCL2 828 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 ZFP14Q9HCL3 533 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 H2AFY2Q9P0M6 372 aaPredicted RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 TBC1D30Q9Y2I9 924 aa8.09□□□□□ -1.11
SCARB2-220ENST00000640076 MYO18AQ92614 2054 aaKnown RBP8.09□□□□□ -1.11
SCARB2-220ENST00000640076 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 BCLAF3A2AJT9 711 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TYW5A2RUC4 315 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 FAM187AA6NFU0 413 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HACD1B0YJ81 288 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 SGK1O00141 431 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RAMP2O60895 175 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 GAS8O95995 478 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RHOXF2BP0C7M4 288 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HOXD9P28356 352 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RBL1P28749 1068 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 YBEYP58557 167 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PFKPQ01813 784 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PPIDQ08752 370 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF177Q13360 481 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PARP15Q460N3 678 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RNF220Q5VTB9 566 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 FYB2Q5VWT5 728 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TPGS1Q6ZTW0 290 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 LYSMD3Q7Z3D4 306 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TMEM25Q86YD3 366 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 CDKL3Q8IVW4 592 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ADGRG2Q8IZP9 1017 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 CCNYQ8ND76 341 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 OR52K2Q8NGK3 314 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 DDI1Q8WTU0 396 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TFB1MQ8WVM0 346 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 BHMTQ93088 406 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ARL8AQ96BM9 186 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ASIC4Q96FT7 647 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RHOXF2Q9BQY4 288 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 BRD8Q9H0E9 1235 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 CCM2LQ9NUG4 571 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 NEU2Q9Y3R4 380 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ILVBLA1L0T0 632 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PRAMEF27A3QJZ7 478 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 DFFAO00273 331 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 TOR1BO14657 336 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 KCNN4O15554 427 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HEXIM1O94992 359 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 LUC7L3O95232 432 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PENKP01210 267 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 CYBBP04839 570 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 SNRPB2P08579 225 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 DHRS4L1P0CG22 281 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RAC2P15153 192 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 VAV1P15498 845 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 STIP1P31948 543 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 HOXD12P35452 270 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PAPOLAP51003 745 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 GNA12Q03113 381 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ZNF33AQ06730 810 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 FCHO2Q0JRZ9 810 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 AP1B1Q10567 949 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 SMAD4Q13485 552 aaKnown RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 POLD3Q15054 466 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ANO4Q32M45 955 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 RHBDF2Q6PJF5 856 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 VITQ6UXI7 678 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 UNC5DQ6UXZ4 953 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 GSTA5Q7RTV2 222 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 SETD3Q86TU7 594 aaPredicted RBP8.08□□□□□ -1.12
SCARB2-220ENST00000640076 LRRC49Q8IUZ0 686 aa8.08□□□□□ -1.12
SCARB2-220ENST00000640076 ZC3H7AQ8IWR0 971 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms