RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CYB5D2Q8WUJ1 264 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 LRRC46Q96FV0 321 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 LRFN5Q96NI6 719 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 SERINC2Q96SA4 455 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 RBM15Q96T37 977 aaKnown RBP eCLIP3.51□□□□□ -1.85
CCDC7-213ENST00000639290 ZKSCAN3Q9BRR0 538 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 RSPO3Q9BXY4 272 aaPredicted RBP3.51□□□□□ -1.85
CCDC7-213ENST00000639290 C22orf23Q9BZE7 217 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 EPS8L2Q9H6S3 715 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 DMRT3Q9NQL9 472 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 ARHGEF38Q9NXL2 777 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 ZIM2Q9NZV7 527 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 TUBGCP4Q9UGJ1 667 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 PFDN2Q9UHV9 154 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 KLF15Q9UIH9 416 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 NOB1Q9ULX3 412 aaKnown RBP3.51□□□□□ -1.85
CCDC7-213ENST00000639290 PPT2Q9UMR5 302 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 ZNF232Q9UNY5 417 aa3.51□□□□□ -1.85
CCDC7-213ENST00000639290 FARSAQ9Y285 508 aaKnown RBP3.51□□□□□ -1.85
CCDC7-213ENST00000639290 A0A1W2PQU0 124 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GOLGA6CA6NDK9 693 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GOLGA6BA6NDN3 693 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 AP1G1O43747 822 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GOLGA6DP0CG33 693 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 HNF1AP20823 631 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CYP2F1P24903 491 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 YWHAQP27348 245 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 HNRNPH3P31942 346 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GPC1P35052 558 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TAF6P49848 677 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 NEK2P51955 445 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RPS21P63220 83 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TMEM95Q3KNT9 176 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 SLC25A35Q3KQZ1 300 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 KLHL22Q53GT1 634 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 XKR9Q5GH70 373 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 C10orf62Q5T681 223 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 FAXCQ5TGI0 409 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TPGS1Q6ZTW0 290 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 SPPL2CQ8IUH8 684 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 MMAAQ8IVH4 418 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GALNT16Q8N428 558 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GOLM1Q8NBJ4 401 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GRIN3AQ8TCU5 1115 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 ZNF560Q96MR9 790 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CEP63Q96MT8 703 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 ZNF396Q96N95 335 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 KIFC3Q9BVG8 833 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 POLR3FQ9H1D9 316 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PCIF1Q9H4Z3 704 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GOLGA6AQ9NYA3 693 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GGA2Q9UJY4 613 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 LCE6AA0A183 80 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TMEM150BA6NC51 233 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 LRRIQ4A6NIV6 560 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CCER2I3L3R5 266 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CYB561D2O14569 222 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 AKAP10O43572 662 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 LILRA1O75019 489 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TSPAN12O95859 305 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PF4P02776 101 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CALM1P0DP23 149 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CALM2P0DP24 149 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CALM3P0DP25 149 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PABPC1P11940 636 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 CPEP16870 476 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PTPN1P18031 435 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 POU4F1Q01851 419 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TAF10Q12962 218 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 IL10RAQ13651 578 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PDE1CQ14123 709 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 EPHA7Q15375 998 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PRR16Q569H4 304 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 C6orf52Q5T4I8 152 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 NT5DC1Q5TFE4 455 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 MPZL3Q6UWV2 235 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 USP45Q70EL2 814 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 SPATC1Q76KD6 591 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 GALNT6Q8NCL4 622 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 SCARF2Q96GP6 870 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 TRIB1Q96RU8 372 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PKP2Q99959 881 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 NUDT22Q9BRQ3 303 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 RBM4Q9BWF3 364 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PHACTR1Q9C0D0 580 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 ZHX3Q9H4I2 956 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 ZSWIM5Q9P217 1185 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 AJAP1Q9UKB5 411 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 INTUQ9ULD6 942 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 MAPRE3Q9UPY8 281 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 HBS1LQ9Y450 684 aaKnown RBP3.5□□□□□ -1.85
CCDC7-213ENST00000639290 PLEKHM1Q9Y4G2 1056 aa3.5□□□□□ -1.85
CCDC7-213ENST00000639290 USP3Q9Y6I4 520 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms