RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 SLC26A11Q86WA9 606 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 FAM71DQ8N9W8 422 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 C19orf18Q8NEA5 215 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 GPR156Q8NFN8 814 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 WDR36Q8NI36 951 aaKnown RBP5.76□□□□□ -1.49
SCN1A-216ENST00000637968 ZFAND1Q8TCF1 268 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 DEPDC1BQ8WUY9 529 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 PPP1R36Q96LQ0 422 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 EBF4Q9BQW3 602 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 FAM83DQ9H4H8 585 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 CHST7Q9NS84 486 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 TRPM5Q9NZQ8 1165 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 KCND2Q9NZV8 630 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 NYAP2Q9P242 653 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 ENTPD4Q9Y227 616 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 CDYLQ9Y232 598 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 PCDHA3Q9Y5H8 950 aa5.76□□□□□ -1.49
SCN1A-216ENST00000637968 ADAMTS13Q76LX8 1427 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 LEUTXA8MZ59 168 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PAPSS1O43252 624 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PRMT3O60678 531 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 GZMAP12544 262 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 HPGDP15428 266 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TIE1P35590 1138 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 CD79BP40259 229 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TKTL1P51854 596 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 HERVK_113P63132 956 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 MPP1Q00013 466 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 YWHAHQ04917 246 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 FAAP100Q0VG06 881 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 NFYCQ13952 458 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ZNF169Q14929 603 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 DUSP6Q16828 381 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ZC3H12BQ5HYM0 836 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 RTP2Q5QGT7 225 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ADGRD1Q6QNK2 874 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 BBS12Q6ZW61 710 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ATG9AQ7Z3C6 839 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 FBXO36Q8NEA4 188 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 OR6F1Q8NGZ6 308 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 URGCPQ8TCY9 931 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 AGR3Q8TD06 166 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 SLC5A5Q92911 643 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 HYLS1Q96M11 299 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ZSWIM3Q96MP5 696 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 FRMD6Q96NE9 622 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 NODALQ96S42 347 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TCEAL7Q9BRU2 100 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 NAT9Q9BTE0 207 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 NIFKQ9BYG3 293 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ROGDIQ9GZN7 287 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ACSS3Q9H6R3 686 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 KAT8Q9H7Z6 458 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 VAT1LQ9HCJ6 419 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PAK6Q9NQU5 681 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ARHGEF4Q9NR80 690 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TMEM216Q9P0N5 145 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 LRFN2Q9ULH4 789 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 MYH15Q9Y2K3 1946 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 USP32Q8NFA0 1604 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 NT5C1B-RDH14C9J2C7 533 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 UBE2Q2LH0YL09 131 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ERBB2P04626 1255 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 LCKP06239 509 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 RBP1P09455 135 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 CYP2A6P11509 494 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PRKAR2AP13861 404 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PTPN1P18031 435 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 RORAP35398 523 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 CPOXP36551 454 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ATP5OP48047 213 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 GBX2P52951 348 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PRMT2P55345 433 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PSME3P61289 254 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 SETMARQ53H47 684 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 IRF2BP2Q7Z5L9 587 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 IFNEQ86WN2 208 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TBC1D10CQ8IV04 446 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ADGRG5Q8IZF4 528 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 DNAAF3Q8N9W5 541 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 MECRQ9BV79 373 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ZYG11BQ9C0D3 744 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 LHPPQ9H008 270 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 C6orf50Q9HD87 102 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ACOXLQ9NUZ1 547 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 GMPR2Q9P2T1 348 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PCDHGA7Q9Y5G6 932 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 USP6P35125 1406 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 ADGRB3O60242 1522 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 C7orf72A4D263 438 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 KCNK1O00180 336 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 PLA2G6O60733 806 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 SLC22A5O76082 557 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 TYK2P29597 1187 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 GRIA3P42263 894 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 RPS9P46781 194 aaKnown RBP5.75□□□□□ -1.49
SCN1A-216ENST00000637968 FNTBP49356 437 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 STX4Q12846 297 aa5.75□□□□□ -1.49
SCN1A-216ENST00000637968 IL18R1Q13478 541 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms