RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 VPS54Q9P1Q0 977 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 UXTQ9UBK9 157 aaPredicted RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 TUBGCP4Q9UGJ1 667 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 AFF4Q9UHB7 1163 aaKnown RBP3.05□□□□□ -1.92
VIM-210ENST00000637053 CYTH4Q9UIA0 394 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 BTBD3Q9Y2F9 522 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 DNAJC16Q9Y2G8 782 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 PCDHB4Q9Y5E5 795 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 PCDHB2Q9Y5E7 798 aa3.05□□□□□ -1.92
VIM-210ENST00000637053 KDM3AQ9Y4C1 1321 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 A0A075B6Q4 140 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 A0A1B0GTQ1 180 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 A0A1B0GUL7 405 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TRBC2A0A5B9 178 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 WDR91A4D1P6 747 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8IPA6NC78 632 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 VWA3AA6NCI4 1184 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SLC15A5A6NIM6 579 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 LIPT2A6NK58 231 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 OR6C75A6NL08 312 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8JA6NMD2 632 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SPECC1L-ADORA2AF8WAN1 911 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 H0Y8X5 98 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8TH3BQL2 631 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 H3BQV1 296 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GCOM1H8Y6P7 765 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 WRBO00258 174 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TGFB1I1O43294 461 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TRAPPC3O43617 180 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NARSO43776 548 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CCNT1O60563 726 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 ZNF623O75123 536 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TMCC1O94876 653 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 PCDH8O95206 1070 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CHEK2O96017 543 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MT-ATP6P00846 226 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 IGHEP01854 428 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KRT6BP04259 564 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CYP1A1P04798 512 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 PCCBP05166 539 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SCG5P05408 212 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KRT8P05787 483 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ACAA1P09110 424 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 ZCCHC18P0CG32 403 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GOLGA8HP0CJ92 632 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CCDC192P0DO97 292 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CYP2C8P10632 490 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 UROSP10746 265 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 THRBP10828 461 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TYRP14679 529 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 DDX5P17844 614 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CYP2B6P20813 491 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CALB2P22676 271 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 IL32P24001 234 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ITGB8P26012 769 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GABRB3P28472 473 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 PTPN6P29350 595 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CCND2P30279 289 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RRM2P31350 389 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 BSGP35613 385 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SREBF1P36956 1147 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ADCY8P40145 1251 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 PRKCIP41743 596 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ECI1P42126 302 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RANBP1P43487 201 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ACADSBP45954 432 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GABRB2P47870 512 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 FASLGP48023 281 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NRIP1P48552 1158 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KRT6CP48668 564 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 HSPA13P48723 471 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SLC11A1P49279 550 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ALDH7A1P49419 539 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 LIG4P49917 911 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KHKP50053 298 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NAGLUP54802 743 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 BCAR1P56945 870 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 GSDMDP57764 484 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RPS16P62249 146 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 EEF1A1P68104 462 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 NKX6-1P78426 367 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 AMPD2Q01433 879 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 EEF1A2Q05639 463 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 DPTQ07507 201 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NCBP1Q09161 790 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 SCAPQ12770 1279 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TBL3Q12788 808 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 PTP4A2Q12974 167 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ABRQ12979 859 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 AIMP2Q13155 320 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 TUBB3Q13509 450 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TSTA3Q13630 321 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 NONOQ15233 471 aaKnown RBP eCLIP3.04□□□□□ -1.92
VIM-210ENST00000637053 MED22Q15528 200 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CEBPEQ15744 281 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NFIL3Q16649 462 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 UGP2Q16851 508 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 HYAL4Q2M3T9 481 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RGS21Q2M5E4 152 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 LEXMQ3ZCV2 418 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms