RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NRCAMQ92823 1304 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PHGDHO43175 533 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 CAPNS1P04632 268 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SLC2A3P11169 496 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 KCNE1P15382 129 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SLC7A1P30825 629 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GLRBP48167 497 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 NUMBP49757 651 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 UCNP55089 124 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PRAMEP78395 509 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TSPY1Q01534 308 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CREMQ03060 361 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ARHGAP1Q07960 439 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CACNB2Q08289 660 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TMED1Q13445 227 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 GRM3Q14832 879 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 KIZQ2M2Z5 673 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PIGGQ5H8A4 983 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 BRMS1LQ5PSV4 323 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 IRAK1BP1Q5VVH5 260 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TWF2Q6IBS0 349 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 KIAA0930Q6ICG6 404 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 TTC33Q6PID6 262 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 CLEC14AQ86T13 490 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ZC3HC1Q86WB0 502 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 HERC6Q8IVU3 1022 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 MYO1HQ8N1T3 1032 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 FIBCD1Q8N539 461 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 OSCP1Q8WVF1 389 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 WBP1Q96G27 269 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PRICKLE1Q96MT3 831 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF778Q96MU6 729 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TSGA13Q96PP4 275 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 OR52B2Q96RD2 323 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CENPOQ9BU64 300 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CEP41Q9BYV8 373 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 ULBP1Q9BZM6 244 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 CAAP1Q9H8G2 361 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PLGRKTQ9HBL7 147 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TRPV5Q9NQA5 729 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 TUBGCP4Q9UGJ1 667 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 PTBP2Q9UKA9 531 aaKnown RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 FBXW11Q9UKB1 542 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 DSEQ9UL01 958 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 FIS1Q9Y3D6 152 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 HEMK1Q9Y5R4 338 aaPredicted RBP4□□□□□ -1.77
SCN1A-214ENST00000637038 PSAT1Q9Y617 370 aa4□□□□□ -1.77
SCN1A-214ENST00000637038 SMIM35A0A1B0GVV1 85 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TRIM64CA6NLI5 447 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C9IYK1 514 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 G3V2L1 256 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DCLK1O15075 740 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TRMUO75648 421 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C1RP00736 705 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C7P10643 843 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CPB1P15086 417 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 XRCC1P18887 633 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FASP25445 335 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 HMOX2P30519 316 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SLC26A3P40879 764 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GJA9P57773 515 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CREB5Q02930 508 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZP2Q05996 745 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ITKQ08881 620 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GPM6BQ13491 265 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SMAD1Q15797 465 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF423Q2M1K9 1284 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF470Q6ECI4 717 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NEPROQ6NW34 567 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ERI1Q8IV48 349 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 SLC41A1Q8IVJ1 513 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GIPC2Q8TF65 315 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 COPS5Q92905 334 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 POP5Q969H6 163 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NACC2Q96BF6 587 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PPP1R36Q96LQ0 422 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FCRL5Q96RD9 977 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C20orf27Q9GZN8 174 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ABHD16BQ9H3Z7 469 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 WDR55Q9H6Y2 383 aaPredicted RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CDHR5Q9HBB8 845 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 GLOD4Q9HC38 313 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 EVA1BQ9NVM1 165 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PIH1D1Q9NWS0 290 aaKnown RBP3.99□□□□□ -1.77
SCN1A-214ENST00000637038 FBXO5Q9UKT4 447 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 CDH9Q9ULB4 789 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 VPS9D1Q9Y2B5 631 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 TCAF1Q9Y4C2 921 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 USP3Q9Y6I4 520 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 AQP12BA6NM10 295 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 C16orf96A6NNT2 1141 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 PIRO00625 290 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZBTB14O43829 449 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 NRP2O60462 931 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 DNAJA2O60884 412 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 USP12O75317 370 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 H6PDO95479 791 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF286BP0CG31 522 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 ODC1P11926 461 aa3.99□□□□□ -1.77
SCN1A-214ENST00000637038 MYCLP1P12525 358 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms