RNA–Protein interactions for RNA: ENST00000636436.1

SYNGAP1-214, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-214ENST00000636436 PTPN13Q12923 2485 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 KNTC1P50748 2209 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 IGHV1OR21-1A0A087WYE8 117 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 IGHV5-10-1A0A0J9YXX1 117 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TSPAN11A1L157 253 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 BLACEA4D250 179 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TMEM202A6NGA9 273 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ARHGAP42A6NI28 874 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PRR19A6NJB7 356 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CYSRT1A8MQ03 144 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 BECN2A8MW95 431 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 EIF3CLB5ME19 914 aaKnown RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RASA4BC9J798 803 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PSMD11O00231 422 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 BIN1O00499 593 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 POLR1CO15160 346 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RASA4O43374 803 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CREB3O43889 395 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SOCS5O75159 536 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 LRCH4O75427 683 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RFPL1O75677 317 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PALMO75781 387 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RECQL5O94762 991 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 STK17BO94768 372 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 LRIG2O94898 1065 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PIGNO95427 931 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ECEL1O95672 775 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 MT-ND3P03897 115 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CALB1P05937 261 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CELA2BP08218 269 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PLEKP08567 350 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CCDC172P0C7W6 258 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CCNYL3P0C7X3 344 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 FGF3P11487 239 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CYP2A6P11509 494 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 KRT3P12035 628 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 MYCLP1P12525 358 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TIMP2P16035 220 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TFE3P19532 575 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SLC9A1P19634 815 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CA4P22748 312 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PON1P27169 355 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CASP14P31944 242 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CDH5P33151 784 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 FLT3P36888 993 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 HSPA9P38646 679 aaKnown RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ETV5P41161 510 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ACTR1BP42025 376 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PTPN9P43378 593 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NSFP46459 744 aaKnown RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 GNPDA1P46926 289 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CSNK1DP48730 415 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RENBPP51606 427 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ZNF135P52742 658 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NDST2P52849 883 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 STX17P56962 302 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 OR1D5P58170 312 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TPI1P60174 286 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ACTR1AP61163 376 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 AP1S1P61966 158 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 HHEXQ03014 270 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SRSF6Q13247 344 aaKnown RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 LRP8Q14114 963 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 BECN1Q14457 450 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ZNF235Q14590 738 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NAA30Q147X3 362 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NR1D2Q14995 579 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 IGFBP7Q16270 282 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 MAN2A1Q16706 1144 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 DEFB109BQ30KR1 87 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PPP1R15BQ5SWA1 713 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TPRG1LQ5T0D9 272 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 OTUD1Q5VV17 481 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NAA35Q5VZE5 725 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RAET1GQ6H3X3 334 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TCTN3Q6NUS6 607 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PPP1R2P3Q6NXS1 205 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 PNCKQ6P2M8 343 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 C16orf46Q6P387 395 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 DNAJC24Q6P3W2 148 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SCYL2Q6P3W7 929 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TMEM71Q6P5X7 295 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 GJB7Q6PEY0 223 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SLC30A9Q6PML9 568 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 WDR74Q6RFH5 385 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 TRIM72Q6ZMU5 477 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 ASB18Q6ZVZ8 466 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 USP45Q70EL2 814 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SLFN11Q7Z7L1 901 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 NLRP14Q86W24 1093 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 GALNT13Q8IUC8 556 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 CCDC13Q8IYE1 715 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 FAM71AQ8IYT1 594 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 WDTC1Q8N5D0 677 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 LZTR1Q8N653 840 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 RTL3Q8N8U3 475 aaKnown RBP3□□□□□ -1.93
SYNGAP1-214ENST00000636436 EPS8L1Q8TE68 723 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 SSC4DQ8WTU2 575 aa3□□□□□ -1.93
SYNGAP1-214ENST00000636436 FAM172AQ8WUF8 416 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms