RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 PAFAH1B3Q15102 231 aaKnown RBP19.01■□□□□ 0.63
CLN6-213ENST00000636212 CDCP2Q5VXM1 449 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 VSTM4Q8IW00 320 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 LSMEM2Q8N112 164 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 PGBD5Q8N414 524 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 PLA2G15Q8NCC3 412 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 OR56A4Q8NGH8 313 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 GRAMD1AQ96CP6 724 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 CLPBQ9H078 707 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 ABHD10Q9NUJ1 306 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 GULP1Q9UBP9 304 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 MOSPD1Q9UJG1 213 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 PADI4Q9UM07 663 aa19.01■□□□□ 0.63
CLN6-213ENST00000636212 GOLGA4Q13439 2230 aaKnown RBP19■□□□□ 0.63
CLN6-213ENST00000636212 PSMD11O00231 422 aa19■□□□□ 0.63
CLN6-213ENST00000636212 MATN3O15232 486 aa19■□□□□ 0.63
CLN6-213ENST00000636212 CSO75390 466 aaKnown RBP19■□□□□ 0.63
CLN6-213ENST00000636212 HOXC4P09017 264 aaPredicted RBP19■□□□□ 0.63
CLN6-213ENST00000636212 IL4RP24394 825 aa19■□□□□ 0.63
CLN6-213ENST00000636212 CCNCP24863 283 aa19■□□□□ 0.63
CLN6-213ENST00000636212 ABCG1P45844 678 aa19■□□□□ 0.63
CLN6-213ENST00000636212 EPHB1P54762 984 aa19■□□□□ 0.63
CLN6-213ENST00000636212 GALNT2Q10471 571 aa19■□□□□ 0.63
CLN6-213ENST00000636212 MESDQ14696 234 aa19■□□□□ 0.63
CLN6-213ENST00000636212 COL28A1Q2UY09 1125 aa19■□□□□ 0.63
CLN6-213ENST00000636212 ATP13A4Q4VNC1 1196 aa19■□□□□ 0.63
CLN6-213ENST00000636212 NCBP2-AS2Q69YL0 99 aa19■□□□□ 0.63
CLN6-213ENST00000636212 PNCKQ6P2M8 343 aa19■□□□□ 0.63
CLN6-213ENST00000636212 CNGA4Q8IV77 575 aa19■□□□□ 0.63
CLN6-213ENST00000636212 SLC35F3Q8IY50 421 aa19■□□□□ 0.63
CLN6-213ENST00000636212 ARL10Q8N8L6 244 aa19■□□□□ 0.63
CLN6-213ENST00000636212 RNF214Q8ND24 703 aa19■□□□□ 0.63
CLN6-213ENST00000636212 OR6C4Q8NGE1 309 aa19■□□□□ 0.63
CLN6-213ENST00000636212 PCDH19Q8TAB3 1148 aa19■□□□□ 0.63
CLN6-213ENST00000636212 SEMA3CQ99985 751 aa19■□□□□ 0.63
CLN6-213ENST00000636212 PACSIN1Q9BY11 444 aa19■□□□□ 0.63
CLN6-213ENST00000636212 AMACRQ9UHK6 382 aa19■□□□□ 0.63
CLN6-213ENST00000636212 PNMA8BQ9ULN7 279 aaPredicted RBP19■□□□□ 0.63
CLN6-213ENST00000636212 GPR34Q9UPC5 381 aa19■□□□□ 0.63
CLN6-213ENST00000636212 TTLL3Q9Y4R7 772 aa19■□□□□ 0.63
CLN6-213ENST00000636212 DGKBQ9Y6T7 804 aa19■□□□□ 0.63
CLN6-213ENST00000636212 ASPMQ8IZT6 3477 aa19■□□□□ 0.63
CLN6-213ENST00000636212 SPEGQ15772 3267 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 A0A087WV48 116 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 TNFRSF10CO14798 259 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 BRINP1O60477 761 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 USP12O75317 370 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 TCEA3O75764 348 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 HEXIM1O94992 359 aaKnown RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 PGLSO95336 258 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 ARHGAP25P42331 645 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 ARSEP51690 589 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 TRAF2Q12933 501 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 CNGA3Q16281 694 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 RHOT2Q8IXI1 618 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 TEX26Q8N6G2 289 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 CCNYQ8ND76 341 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 FGF11Q92914 225 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 FUBP1Q96AE4 644 aaKnown RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 SCRN2Q96FV2 425 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 COQ10AQ96MF6 247 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 SYNDIG1Q9H7V2 258 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 PHPT1Q9NRX4 125 aaPredicted RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 RBM22Q9NW64 420 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLN6-213ENST00000636212 RALYQ9UKM9 306 aaKnown RBP18.99■□□□□ 0.63
CLN6-213ENST00000636212 DNPEPQ9ULA0 475 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 RAI2Q9Y5P3 530 aa18.99■□□□□ 0.63
CLN6-213ENST00000636212 LRRK1Q38SD2 2015 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 MYLKQ15746 1914 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 GOLGA6CA6NDK9 693 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 GOLGA6BA6NDN3 693 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 MFAP3LO75121 409 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 GOLGA6DP0CG33 693 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TGM2P21980 687 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TRIM23P36406 574 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TAS2R40P59535 323 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TCEA2Q15560 299 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 ASTE1Q2TB18 679 aaPredicted RBP18.98■□□□□ 0.63
CLN6-213ENST00000636212 TAF8Q7Z7C8 310 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 SLC35G2Q8TBE7 412 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 FATE1Q969F0 183 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 PDXPQ96GD0 296 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 NSMCE3Q96MG7 304 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TSGA13Q96PP4 275 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■■■□ 25.8
CLN6-213ENST00000636212 CCDC3Q9BQI4 270 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 MAK16Q9BXY0 300 aaKnown RBP18.98■□□□□ 0.63
CLN6-213ENST00000636212 NHEJ1Q9H9Q4 299 aaPredicted RBP18.98■□□□□ 0.63
CLN6-213ENST00000636212 GOLGA6AQ9NYA3 693 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 SIRPGQ9P1W8 387 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 PCDHB1Q9Y5F3 818 aa18.98■□□□□ 0.63
CLN6-213ENST00000636212 TMEM202A6NGA9 273 aa18.97■□□□□ 0.63
CLN6-213ENST00000636212 CELA2BP08218 269 aaPredicted RBP18.97■□□□□ 0.63
CLN6-213ENST00000636212 MYCLP1P12525 358 aaPredicted RBP18.97■□□□□ 0.63
CLN6-213ENST00000636212 CCNB1P14635 433 aa18.97■□□□□ 0.63
CLN6-213ENST00000636212 KDELR1P24390 212 aa18.97■□□□□ 0.63
CLN6-213ENST00000636212 EIF2S3P41091 472 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms