RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 IGDCC3Q8IVU1 814 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 BBS5Q8N3I7 341 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 FAM131CQ96AQ9 280 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 IFT43Q96FT9 208 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 DYRK4Q9NR20 520 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 PCYT1BQ9Y5K3 369 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-209ENST00000635828 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
CDKL5-209ENST00000635828 LOC400499M0QZD8 3231 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 C1orf232A0A0U1RR37 186 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 RNGTTO60942 597 aaKnown RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 C6P13671 934 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 FNTAP49354 379 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF284Q2VY69 593 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ALS2CLQ60I27 953 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 LIPIQ6XZB0 460 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF572Q7Z3I7 529 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 TRIM74Q86UV6 250 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF641Q96N77 438 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 NAP1L3Q99457 506 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 TBL1YQ9BQ87 522 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 OR1A2Q9Y585 309 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ALOX15BO15296 676 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 AP2A1O95782 977 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 SEMA5AQ13591 1074 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 PLK5Q496M5 336 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 RNASEH2BQ5TBB1 312 aaKnown RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 TUBGCP5Q96RT8 1024 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 VAT1Q99536 393 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 HDAC8Q9BY41 377 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 L2HGDHQ9H9P8 463 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 CHRAC1Q9NRG0 131 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 GRHL1Q9NZI5 618 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 MAP3K13O43283 966 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 WNT1P04628 370 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ITGA8P53708 1063 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 RAD51Q06609 339 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 TTC31Q49AM3 519 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 ZNF542PQ5EBM4 170 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 DSG4Q86SJ6 1040 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 NAT8LQ8N9F0 302 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 GPR26Q8NDV2 337 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 SLC6A18Q96N87 628 aa8.54□□□□□ -1.04
CDKL5-209ENST00000635828 KLF6Q99612 283 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-209ENST00000635828 TSPAN11A1L157 253 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 E7EVH7 732 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MTSS1O43312 755 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 SOCS5O75159 536 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MTX2O75431 263 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MYBL2P10244 700 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MGAT1P26572 445 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 DHPSP49366 369 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 ARSDP51689 593 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 PTK6Q13882 451 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 WHAMMP3Q1A5X7 153 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 IZUMO3Q5VZ72 239 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 WDR5BQ86VZ2 330 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MAIP1Q8WWC4 291 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 LENG8Q96PV6 779 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 OSBPL1AQ9BXW6 950 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 FAM96AQ9H5X1 160 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 PLAC1Q9HBJ0 212 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 PAK5Q9P286 719 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 SLC17A6Q9P2U8 582 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 CABIN1Q9Y6J0 2220 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GVINP1Q7Z2Y8 2422 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 PLXNB3Q9ULL4 1909 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 CXorf51AA0A1B0GTR3 108 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA6CA6NDK9 693 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA6BA6NDN3 693 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 EFCAB8A8MWE9 144 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 RECQL5O94762 991 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 IGLV3-19P01714 112 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA6DP0CG33 693 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 HSPA9P38646 679 aaKnown RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MPP3Q13368 585 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 TMEM259Q4ZIN3 620 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 BRAT1Q6PJG6 821 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 DNAAF3Q8N9W5 541 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GAB3Q8WWW8 586 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 MCCC1Q96RQ3 725 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 ZSCAN32Q9NX65 697 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 SYBUQ9NX95 663 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 GOLGA6AQ9NYA3 693 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 CFAP69A5D8W1 941 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 CAPN8A6NHC0 703 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 C10orf142B7Z368 130 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 STK10O94804 968 aaKnown RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 HEXIM1O94992 359 aaKnown RBP8.53□□□□□ -1.04
CDKL5-209ENST00000635828 NDST3O95803 873 aa8.53□□□□□ -1.04
CDKL5-209ENST00000635828 SOD1P00441 154 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms