RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ABCA11PQ4W5N1 156 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ALG1LQ6GMV1 187 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PGM2L1Q6PCE3 622 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RAVER1Q8IY67 606 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 OR7A2PQ8NGA2 310 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 OR14C36Q8NHC7 312 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ADAMTS15Q8TE58 950 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 LMLNQ96KR4 655 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MYOCQ99972 504 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TBC1D24Q9ULP9 559 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PCDHB3Q9Y5E6 796 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ARHGEF5Q12774 1597 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MRASO14807 208 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RNASEH2AO75792 299 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 C22orf31O95567 290 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PRH1P02810 166 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 BGNP21810 368 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 FOXO4P98177 505 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 NOGQ13253 232 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PPIGQ13427 754 aaKnown RBP eCLIP5.57□□□□□ -1.528e-7■■■□□ 15.7
SCN1A-209ENST00000635750 RFX4Q33E94 735 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC9B1Q4ZJI4 515 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ALG10Q5BKT4 473 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC30A6Q6NXT4 461 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MOXD1Q6UVY6 613 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 KYAT3Q6YP21 454 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 KDM7AQ6ZMT4 941 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GCNT7Q6ZNI0 430 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ADAMTSL2Q86TH1 951 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SNX32Q86XE0 403 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TCAIMQ8N3R3 496 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ALLCQ8N6M5 410 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SLC2A14Q8TDB8 520 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 AKAP1Q92667 903 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CPNE2Q96FN4 548 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 LRMDAQ9H2I8 198 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GPRC5CQ9NQ84 441 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SERINC1Q9NRX5 453 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 MEMO1Q9Y316 297 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ZCCHC18P0CG32 403 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PSMD8P48556 350 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CLCN7P51798 805 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CDKL1Q00532 357 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RIN1Q13671 783 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GJB7Q6PEY0 223 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RBFAQ8N0V3 343 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF615Q8N8J6 731 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 NAT16Q8N8M0 369 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 GMCL1P1Q8NEA9 526 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 KBTBD8Q8NFY9 601 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 OR2W6PQ8NHA6 318 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ADAM32Q8TC27 787 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DENND1AQ8TEH3 1009 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 OVCA2Q8WZ82 227 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM125Q96AQ2 219 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 RBM18Q96H35 190 aaKnown RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 SENP8Q96LD8 212 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 NSMCE3Q96MG7 304 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM68Q96MH6 324 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 TRAPPC9Q96Q05 1148 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 DGCR6LQ9BY27 220 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ALDH8A1Q9H2A2 487 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-209ENST00000635750 PFDN2Q9UHV9 154 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 ERVW-1Q9UQF0 538 aa5.57□□□□□ -1.52
SCN1A-209ENST00000635750 POLR1AO95602 1720 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF726A6NNF4 738 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 RIIAD1A6NNX1 92 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CBFA2T3O75081 653 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PAEPP09466 180 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 UBXN2BQ14CS0 331 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 VPS26BQ4G0F5 336 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 Q4G0T1 1027 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PDCD4Q53EL6 469 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF697Q5TEC3 545 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 C1orf186Q6ZWK4 172 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 ADGRG6Q86SQ4 1221 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 C4orf19Q8IY42 314 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 PNLDC1Q8NA58 520 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FBXO30Q8TB52 745 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 KLHL32Q96NJ5 620 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 USB1Q9BQ65 265 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 SEMA4BQ9NPR2 832 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 NDRG2Q9UN36 371 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LRCH1Q9Y2L9 728 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 MED31Q9Y3C7 131 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 A0A087WXM4 84 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 METTL21EPA6NDL7 271 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FOXN3O00409 490 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CFIP05156 583 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 LTA4HP09960 611 aaKnown RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 NR2F6P10588 404 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CYP4F2P78329 520 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 OC90Q02509 493 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-209ENST00000635750 CYP4F3Q08477 520 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 C1orf189Q5VU69 101 aa5.56□□□□□ -1.52
SCN1A-209ENST00000635750 FAM92BQ6ZTR7 304 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms