RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GDAQ9Y2T3 454 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 RABGAP1Q9Y3P9 1069 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 WDFY3Q8IZQ1 3526 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 MYH1P12882 1939 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 MYH7P12883 1935 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 COL11A1P12107 1806 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PLXNA1Q9UIW2 1896 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 MROH7-TTC4A0A0A0MT08 1334 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 LCTP09848 1927 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 MYH8P13535 1937 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 FSD2A1L4K1 749 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 DDTLA6NHG4 134 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 AP4M1O00189 453 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PEX12O00623 359 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 CXCL11O14625 94 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 FIBPO43427 364 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 ENTPD3O75355 529 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 GFPT2O94808 682 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 MBPP02686 304 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 MYCLP12524 364 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 IGFBP2P18065 325 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 RPS6KB1P23443 525 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PSMA4P25789 261 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 DUSP1P28562 367 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 GPD2P43304 727 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 POLD2P49005 469 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 DIO1P49895 249 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 CCR9P51686 369 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PDE1AP54750 535 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TAS2R50P59544 299 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 RPP30P78346 268 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TXNL4AP83876 142 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 E2F1Q01094 437 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 RNASELQ05823 741 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 CCDC15Q0P6D6 951 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SEC23BQ15437 767 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 NFIL3Q16649 462 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 LRIT3Q3SXY7 679 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PLAC9Q5JTB6 97 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 HAUS3Q68CZ6 603 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TMEM88Q6PEY1 159 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 NAPRTQ6XQN6 538 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 KRBA2Q6ZNG9 492 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 DPY19L3Q6ZPD9 716 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 Q6ZWC4 215 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TMTC3Q6ZXV5 915 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 H1FNTQ75WM6 255 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC29A4Q7RTT9 530 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 R3HCC1LQ7Z5L2 792 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 CHD1LQ86WJ1 897 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 RFX6Q8HWS3 928 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SFTPA1Q8IWL2 248 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 LAS2Q8IYD9 372 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 DCP1BQ8IZD4 617 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PELI3Q8N2H9 469 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 U2AF1L4Q8WU68 220 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D5Q92609 795 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 USP6NLQ92738 828 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SH3KBP1Q96B97 665 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PRR11Q96HE9 360 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 RSRC1Q96IZ7 334 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 ASB2Q96Q27 587 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SNX18Q96RF0 628 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PARK7Q99497 189 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 BARD1Q99728 777 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PDCL3Q9H2J4 239 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 FOXP1Q9H334 677 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 IL21RQ9HBE5 538 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SNX15Q9NRS6 342 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D14Q9P2M4 693 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 MORF4L1Q9UBU8 362 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC25A10Q9UBX3 287 aaPredicted RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 SUFUQ9UMX1 484 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 AGTPBP1Q9UPW5 1226 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 ICKQ9UPZ9 632 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PCDHB2Q9Y5E7 798 aa2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 COPG1Q9Y678 874 aaKnown RBP2.66□□□□□ -1.98
SMARCB1-208ENST00000634926 PIEZO1Q92508 2521 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GPR75-ASB3A0A0A6YYF3 556 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GOLGA6L10A0A0M3HER8 536 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GAGE10A6NGK3 116 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A8PA6NJQ4 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A7PA6NKC0 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SH2D7A6NKC9 451 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 IFITM10A6NMD0 228 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 C4orf47A7E2U8 309 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A22PA8MWA6 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A12PA8MX19 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A23PA8MXZ1 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 CES2O00748 559 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 OAZ2O95190 189 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SGPL1O95470 568 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 METTL18O95568 372 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SCGB1D1O95968 90 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TOMM40O96008 361 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ALDOAP04075 364 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 WEE2P0C1S8 567 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A13PP0C7W8 464 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM90A24PP0C7X0 464 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms