RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PTPN9P43378 593 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 LIMK2P53671 638 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 HDAC4P56524 1084 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 TRA2AQ13595 282 aaKnown RBP eCLIP20.2■□□□□ 0.82
TARDBP-228ENST00000629725 NR1D2Q14995 579 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 NCAPHQ15003 741 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 PARP15Q460N3 678 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 PHLDB2Q86SQ0 1253 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 C17orf82Q86X59 251 aaPredicted RBP20.2■□□□□ 0.82
TARDBP-228ENST00000629725 ZSWIM9Q86XI8 627 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 CAMK1DQ8IU85 385 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 CACNA2D3Q8IZS8 1091 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 FAM26EQ8N5C1 309 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 ZDHHC1Q8WTX9 485 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 FAM172AQ8WUF8 416 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 CENPIQ92674 756 aaPredicted RBP20.2■□□□□ 0.82
TARDBP-228ENST00000629725 ART4Q93070 314 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 WDR26Q9H7D7 661 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 ZNF71Q9NQZ8 489 aaPredicted RBP20.2■□□□□ 0.82
TARDBP-228ENST00000629725 UBA2Q9UBT2 640 aaPredicted RBP20.2■□□□□ 0.82
TARDBP-228ENST00000629725 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
TARDBP-228ENST00000629725 SPTAN1Q13813 2472 aaKnown RBP20.19■□□□□ 0.82
TARDBP-228ENST00000629725 C2CD4BA6NLJ0 364 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 FGF1P05230 155 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 ELFN1P0C7U0 828 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 CCNB1P14635 433 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 CD1CP29017 333 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 BIRC2Q13490 618 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 MAN2A1Q16706 1144 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 DPY19L2P1Q6NXN4 242 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 LIPIQ6XZB0 460 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 SLFN11Q7Z7L1 901 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 PYROXD2Q8N2H3 581 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 AGBL5Q8NDL9 886 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 JOSD2Q8TAC2 188 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 C9orf43Q8TAL5 461 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-228ENST00000629725 NTAN1Q96AB6 310 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 TUBGCP5Q96RT8 1024 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 DDA1Q9BW61 102 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 ASPSCR1Q9BZE9 553 aa20.19■□□□□ 0.82
TARDBP-228ENST00000629725 USP9XQ93008 2570 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-228ENST00000629725 PDE2AO00408 941 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-228ENST00000629725 CAPN5O15484 640 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-228ENST00000629725 ECEL1O95672 775 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 CSTF2P33240 577 aaKnown RBP eCLIP20.18■□□□□ 0.82
TARDBP-228ENST00000629725 GPR3P46089 330 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 RALGDSQ12967 914 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 C4orf17Q53FE4 359 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 PNCKQ6P2M8 343 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 OR4D9Q8NGE8 314 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 EPS8L1Q8TE68 723 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 PSMG3-AS1Q96PY0 264 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 GSDMCQ9BYG8 508 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 NDST4Q9H3R1 872 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 ATP13A3Q9H7F0 1226 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 CARS2Q9HA77 564 aaKnown RBP20.18■□□□□ 0.82
TARDBP-228ENST00000629725 SLC39A1Q9NY26 324 aa20.18■□□□□ 0.82
TARDBP-228ENST00000629725 TEX33O43247 280 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 RAD1O60671 282 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 MMP8P22894 467 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 SERPINA4P29622 427 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 ILF3Q12906 894 aaKnown RBP eCLIP20.17■□□□□ 0.826e-6■□□□□ 8.6
TARDBP-228ENST00000629725 KLHDC7AQ5VTJ3 777 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 NRROSQ86YC3 692 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 UMODL1-AS1Q8N2C9 162 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 SLC45A3Q96JT2 553 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 SUDS3Q9H7L9 328 aaPredicted RBP20.17■□□□□ 0.82
TARDBP-228ENST00000629725 CATSPERBQ9H7T0 1116 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 TAAR2Q9P1P5 351 aa20.17■□□□□ 0.82
TARDBP-228ENST00000629725 WASH4PA8MWX3 477 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 CREB3O43889 395 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 MYCLP1P12525 358 aaPredicted RBP20.16■□□□□ 0.82
TARDBP-228ENST00000629725 PRKCSHP14314 528 aaPredicted RBP20.16■□□□□ 0.82
TARDBP-228ENST00000629725 POLR2LP62875 67 aaKnown RBP20.16■□□□□ 0.82
TARDBP-228ENST00000629725 TPD52L1Q16890 204 aaPredicted RBP20.16■□□□□ 0.82
TARDBP-228ENST00000629725 VWA3BQ502W6 1294 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 DCAF12Q5T6F0 453 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 NKAIN2Q5VXU1 208 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 FAM129CQ86XR2 697 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 PELI3Q8N2H9 469 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 PAF1Q8N7H5 531 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 C11orf70Q9BRQ4 267 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
TARDBP-228ENST00000629725 PDFQ9HBH1 243 aa20.16■□□□□ 0.82
TARDBP-228ENST00000629725 J3KR12 359 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 NKX2-8O15522 239 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 THRAP10827 490 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 KRT3P12035 628 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 UCHL3P15374 230 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 GM2AP17900 193 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 MPSTP25325 297 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 AK4P27144 223 aaPredicted RBP20.15■□□□□ 0.82
TARDBP-228ENST00000629725 RAB15P59190 212 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 ACOX1Q15067 660 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 AFMIDQ63HM1 303 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 SRLQ86TD4 932 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 ZNF677Q86XU0 584 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 SLC30A5Q8TAD4 765 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 PATE1Q8WXA2 126 aa20.15■□□□□ 0.82
TARDBP-228ENST00000629725 DPYSL5Q9BPU6 564 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms