RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 COQ10AQ96MF6 247 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 ELF4Q99607 663 aaPredicted RBP11.16□□□□□ -0.62
DDX41-219ENST00000629036 BRD8Q9H0E9 1235 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 KCNF1Q9H3M0 494 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 TM7SF3Q9NS93 570 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 TOR4AQ9NXH8 423 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 KLF15Q9UIH9 416 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 PCOLCE2Q9UKZ9 415 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 EFR3BQ9Y2G0 817 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 PCDHB9Q9Y5E1 797 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 RAI2Q9Y5P3 530 aa11.16□□□□□ -0.62
DDX41-219ENST00000629036 MAST4O15021 2626 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 KNTC1P50748 2209 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 A6NNZ2 444 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 APOC4-APOC2K7ER74 178 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 PPP1R12AO14974 1030 aaPredicted RBP11.15□□□□□ -0.62
DDX41-219ENST00000629036 SH3BP5O60239 455 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 DKK1O94907 266 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 HEXIM1O94992 359 aaKnown RBP11.15□□□□□ -0.62
DDX41-219ENST00000629036 CPP00450 1065 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 APOC2P02655 101 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 CCT8P50990 548 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 IL9RQ01113 521 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 TFDP2Q14188 446 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 SLC14A2Q15849 920 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 ZFYVE27Q5T4F4 411 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 KAZNQ674X7 775 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.62
DDX41-219ENST00000629036 CCNYQ8ND76 341 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.15□□□□□ -0.62
DDX41-219ENST00000629036 HAUS1Q96CS2 278 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 HEMGNQ9BXL5 484 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 OSBPL8Q9BZF1 889 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 GDF3Q9NR23 364 aa11.15□□□□□ -0.62
DDX41-219ENST00000629036 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 A0A0J9YYE9 177 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 SPTY2D1-AS1A0A0U1RR47 76 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 TCRBV7S2A1N4TA0A589 114 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 K7ESM1 405 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 TM7SF2O76062 418 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 SOD1P00441 154 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 TRBC1P01850 177 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 ALPIP09923 528 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 CEACAM1P13688 526 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 VIPR1P32241 457 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 ATXN3P54252 364 aaPredicted RBP11.14□□□□□ -0.63
DDX41-219ENST00000629036 RWDD2BP57060 319 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 C21orf59P57076 290 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 AP1B1Q10567 949 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 EIF2B5Q13144 721 aaKnown RBP11.14□□□□□ -0.63
DDX41-219ENST00000629036 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
DDX41-219ENST00000629036 STAT4Q14765 748 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 SLC45A4Q5BKX6 768 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 KDELC1Q6UW63 502 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 Q6ZSR6 202 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 RFLNAQ6ZTI6 216 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 PEX26Q7Z412 305 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 HSD11B1LQ7Z5J1 315 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
DDX41-219ENST00000629036 GLRX5Q86SX6 157 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 PDZD3Q86UT5 571 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 BBS5Q8N3I7 341 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 PLA2G15Q8NCC3 412 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 ACTL9Q8TC94 416 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 CXorf40AQ8TE69 158 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 NSMCE1Q8WV22 266 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 SCRN2Q96FV2 425 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 KLHDC7BQ96G42 594 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 TEKT5Q96M29 485 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 ZNF830Q96NB3 372 aaPredicted RBP11.14□□□□□ -0.63
DDX41-219ENST00000629036 LYSMD1Q96S90 227 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 C10orf88Q9H8K7 445 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 KLK13Q9UKR3 277 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 PHTF1Q9UMS5 762 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 CHKBQ9Y259 395 aa11.14□□□□□ -0.63
DDX41-219ENST00000629036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
DDX41-219ENST00000629036 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 CAPN8A6NHC0 703 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 GOLGA6L6A8MZA4 724 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 MIF4GDA9UHW6 222 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 NEMP1O14524 444 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 FLRT2O43155 660 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 DFNA5O60443 496 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 RECQL5O94762 991 aaPredicted RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 C1SP09871 688 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 NME1P15531 152 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 CTPS1P17812 591 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 CES1P23141 567 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 HNF1BP35680 557 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 CD86P42081 329 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 RABIFP47224 123 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 OTUD4Q01804 1114 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 BNIP3Q12983 259 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 XRCC4Q13426 336 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 QPCTQ16769 361 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 TEX44Q53QW1 395 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 ARMC12Q5T9G4 340 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 ERAP2Q6P179 960 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms