RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 CCDC34Q96HJ3 373 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 GDAP1L1Q96MZ0 367 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZNF641Q96N77 438 aaPredicted RBP6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 KLHL32Q96NJ5 620 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TEFMQ96QE5 360 aaKnown RBP6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ASPSCR1Q9BZE9 553 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TM6SF2Q9BZW4 377 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZDHHC6Q9H6R6 413 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PDFQ9HBH1 243 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 UBE2TQ9NPD8 197 aaPredicted RBP6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TMPRSS4Q9NRS4 437 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TRNAU1APQ9NX07 287 aaKnown RBP6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 LRIT1Q9P2V4 623 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 LHX3Q9UBR4 397 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 SNX10Q9Y5X0 201 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ACTL7AQ9Y615 435 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 SHANK1Q9Y566 2161 aa6.79□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZNF891A8MT65 544 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FAM72CH0Y354 149 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 KRIT1O00522 736 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TRAFD1O14545 582 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TMCC1O94876 653 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 SMC2O95347 1197 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 DLGAP3O95886 979 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FUCA1P04066 466 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FGF1P05230 155 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 KRT5P13647 590 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 CCNB1P14635 433 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PON1P27169 355 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 CSF2RBP32927 897 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PTPN9P43378 593 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 YBEYP58557 167 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 RAB15P59190 212 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 DEUP1Q05D60 604 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 POLD3Q15054 466 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 IGFBP7Q16270 282 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FAM72AQ5TYM5 149 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PAPD7Q5XG87 772 aaKnown RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FAM72DQ6L9T8 149 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FOXR1Q6PIV2 292 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 BRAT1Q6PJG6 821 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 STRADAQ7RTN6 431 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TTC7BQ86TV6 843 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 PIM3Q86V86 326 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FAM72BQ86X60 149 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 JAMLQ86YT9 394 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 HID1Q8IV36 788 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 UMODL1-AS1Q8N2C9 162 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 AGBL5Q8NDL9 886 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 OR56A4Q8NGH8 313 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 C9orf43Q8TAL5 461 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 CXorf40AQ8TE69 158 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TUBGCP5Q96RT8 1024 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 NUDT22Q9BRQ3 303 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZPBPQ9BS86 351 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 NAA15Q9BXJ9 866 aaKnown RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 TEX101Q9BY14 249 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FRMD8Q9BZ67 464 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 MLXIPLQ9NP71 852 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 FBXO8Q9NRD0 319 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 GULP1Q9UBP9 304 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 KLQ9UEF7 1012 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 OR12D3Q9UGF7 316 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 B3GALT1Q9Y5Z6 326 aa6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 ZFC3H1O60293 1989 aaKnown RBP6.78□□□□□ -1.32
SOX9-AS1-218ENST00000628742 SYNJ2BP-COX16A0A087WUM0 186 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 IGHV1OR21-1A0A087WYE8 117 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 BICDL2A1A5D9 508 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 C2CD4BA6NLJ0 364 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 NEMP1O14524 444 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 RAMP2O60895 175 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 LRIG2O94898 1065 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 TNFP01375 233 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 PRKCGP05129 697 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 CEACAM5P06731 702 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 SLC9A1P19634 815 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 ITIH2P19823 946 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 KELP23276 732 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 MAP4P27816 1152 aaKnown RBP6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 SULT1E1P49888 294 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 LIG3P49916 1009 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 GPLD1P80108 840 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 MC2RQ01718 297 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 PTK2Q05397 1052 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 ABHD18Q0P651 414 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 CDC20Q12834 499 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 KLRB1Q12918 225 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 PARP15Q460N3 678 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 C4orf17Q53FE4 359 aa6.77□□□□□ -1.33
SOX9-AS1-218ENST00000628742 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms