RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 TMTC1Q8IUR5 882 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 BBS5Q8N3I7 341 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 ATPAF2Q8N5M1 289 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 NIPA2Q8N8Q9 360 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 PLA2G15Q8NCC3 412 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 PDCD6IPQ8WUM4 868 aaKnown RBP16.5■□□□□ 0.23
LINC00628-201ENST00000628516 NSMCE1Q8WV22 266 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 TEKT4Q8WW24 435 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 NAT6Q93015 286 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 WDR92Q96MX6 357 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 PCDH18Q9HCL0 1135 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 GULP1Q9UBP9 304 aa16.5■□□□□ 0.23
LINC00628-201ENST00000628516 ANKRD36A6QL64 1941 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 MYO1FO00160 1098 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 CACNB4O00305 520 aaPredicted RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 TNFP01375 233 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 SERPINB6P35237 376 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 HSPA9P38646 679 aaKnown RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 SLC25A11Q02978 314 aaKnown RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 KRT81Q14533 505 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 ACOX1Q15067 660 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 GKN2Q86XP6 184 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 CCDC170Q8IYT3 715 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 LSMEM2Q8N112 164 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 PCDH19Q8TAB3 1148 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 CTNNBL1Q8WYA6 563 aaPredicted RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 BAG1Q99933 345 aaPredicted RBP16.49■□□□□ 0.23
LINC00628-201ENST00000628516 SIRPGQ9P1W8 387 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 B4GALT6Q9UBX8 382 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 PADI4Q9UM07 663 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 PCDHGC4Q9Y5F7 938 aa16.49■□□□□ 0.23
LINC00628-201ENST00000628516 IGSF10Q6WRI0 2623 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 MAFKO60675 156 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 PEX11BO96011 259 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 CR2P20023 1033 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
LINC00628-201ENST00000628516 LSSP48449 732 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 CDH6P55285 790 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 GSDMDP57764 484 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 MAXP61244 160 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 SOWAHCQ53LP3 525 aaPredicted RBP16.48■□□□□ 0.23
LINC00628-201ENST00000628516 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 RBM44Q6ZP01 1051 aaKnown RBP16.48■□□□□ 0.23
LINC00628-201ENST00000628516 PGBD5Q8N414 524 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 ARL10Q8N8L6 244 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 FUBP1Q96AE4 644 aaKnown RBP16.48■□□□□ 0.23
LINC00628-201ENST00000628516 PDXPQ96GD0 296 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 ZNF578Q96N58 590 aaPredicted RBP16.48■□□□□ 0.23
LINC00628-201ENST00000628516 NUDCD1Q96RS6 583 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 CCDC3Q9BQI4 270 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 SYNDIG1Q9H7V2 258 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 POLR1BQ9H9Y6 1135 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 NOD2Q9HC29 1040 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 GPR34Q9UPC5 381 aa16.48■□□□□ 0.23
LINC00628-201ENST00000628516 A0A1W2PQ67 120 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 TMEM202A6NGA9 273 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 HTRA2O43464 458 aaPredicted RBP16.47■□□□□ 0.23
LINC00628-201ENST00000628516 SOCS5O75159 536 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 TCEA3O75764 348 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 CPP00450 1065 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 GM2AP17900 193 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 MMP13P45452 471 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 KIAA1024LP59773 190 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 MMRN1Q13201 1228 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
LINC00628-201ENST00000628516 C3orf38Q5JPI3 329 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 MARC1Q5VT66 337 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 KCTD16Q68DU8 428 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 RAD9BQ6WBX8 426 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 TMEM139Q8IV31 216 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 SDR16C5Q8N3Y7 309 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 KYQ8NBH2 561 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 OR56A4Q8NGH8 313 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 WDR48Q8TAF3 677 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 ZNF564Q8TBZ8 553 aaPredicted RBP16.47■□□□□ 0.23
LINC00628-201ENST00000628516 GRAMD1AQ96CP6 724 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 ATXN7L3BQ96GX2 97 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 NAF1Q96HR8 494 aaKnown RBP16.47■□□□□ 0.23
LINC00628-201ENST00000628516 MGME1Q9BQP7 344 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 MRPL40Q9NQ50 206 aaKnown RBP16.47■□□□□ 0.23
LINC00628-201ENST00000628516 CTTNBP2NLQ9P2B4 639 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 ENTPD2Q9Y5L3 495 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 DGKBQ9Y6T7 804 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 RP1P56715 2156 aa16.47■□□□□ 0.23
LINC00628-201ENST00000628516 CASC3O15234 703 aaKnown RBP16.46■□□□□ 0.23
LINC00628-201ENST00000628516 NDUFA10O95299 355 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 CD48P09326 243 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 CYP2A6P11509 494 aaPredicted RBP16.46■□□□□ 0.23
LINC00628-201ENST00000628516 KELP23276 732 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 IL4RP24394 825 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 NFKBIAP25963 317 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 VIPR1P32241 457 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 GJC1P36383 396 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 MAGEA1P43355 309 aa16.46■□□□□ 0.23
LINC00628-201ENST00000628516 PCBP4P57723 403 aaKnown RBP16.46■□□□□ 0.23
LINC00628-201ENST00000628516 TRAF2Q12933 501 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms