RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ZNF135P52742 658 aaPredicted RBP16.54■□□□□ 0.24
TRIM29-221ENST00000627238 AP1S1P61966 158 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 B4GALNT1Q00973 533 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 BCL2L1Q07817 233 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 IL10RBQ08334 325 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 TGIF1Q15583 401 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 ACAD10Q6JQN1 1059 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PNCKQ6P2M8 343 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 RBM43Q6ZSC3 357 aaKnown RBP16.54■□□□□ 0.24
TRIM29-221ENST00000627238 USP53Q70EK8 1073 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 TAF8Q7Z7C8 310 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 JAMLQ86YT9 394 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PSTKQ8IV42 348 aaKnown RBP16.54■□□□□ 0.24
TRIM29-221ENST00000627238 FAM46DQ8NEK8 389 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 NEK11Q8NG66 645 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 KIAA1524Q8TCG1 905 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 GPBAR1Q8TDU6 330 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PSKH2Q96QS6 385 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 SYT11Q9BT88 431 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 TMEM168Q9H0V1 697 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 WDR26Q9H7D7 661 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 SEPT10Q9P0V9 454 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PISDQ9UG56 409 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 AP4E1Q9UPM8 1137 aa16.54■□□□□ 0.24
TRIM29-221ENST00000627238 PRAMEF33A0A0G2JMD5 474 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 A0A1W2PQ67 120 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 PRSS38A1L453 326 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 PRAMEF10O60809 474 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 PALMO75781 387 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 PRKCGP05129 697 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 SFTPCP11686 197 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 ITGB6P18564 788 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 COPB1P53618 953 aaKnown RBP16.53■□□□□ 0.24
TRIM29-221ENST00000627238 KCNC4Q03721 635 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 DCUN1D2Q6PH85 259 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 TMPRSS9Q7Z410 1059 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 CBARPQ8N350 705 aaPredicted RBP16.53■□□□□ 0.24
TRIM29-221ENST00000627238 CELF6Q96J87 481 aaKnown RBP16.53■□□□□ 0.24
TRIM29-221ENST00000627238 COQ10AQ96MF6 247 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 CINPQ9BW66 212 aaPredicted RBP16.53■□□□□ 0.24
TRIM29-221ENST00000627238 LGR4Q9BXB1 951 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 MRPL40Q9NQ50 206 aaKnown RBP16.53■□□□□ 0.24
TRIM29-221ENST00000627238 FANCLQ9NW38 375 aa16.53■□□□□ 0.24
TRIM29-221ENST00000627238 C9orf172C9J069 976 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 EEF2KO00418 725 aaKnown RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 HGSO14964 777 aaPredicted RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 HTRA2O43464 458 aaPredicted RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 SOCS5O75159 536 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 CPNE6O95741 557 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 MYCLP1P12525 358 aaPredicted RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 CCNB1P14635 433 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 ITIH1P19827 911 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 TEAD1P28347 426 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 ETV5P41161 510 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 HCAR3P49019 387 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 CSRP3P50461 194 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 RENBPP51606 427 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 MAMLD1Q13495 774 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 ARHGEF7Q14155 803 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 TCEA2Q15560 299 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 ERMARDQ5T6L9 678 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 PLEKHA7Q6IQ23 1121 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 RFX8Q6ZV50 586 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 PELI3Q8N2H9 469 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 Q8N9G6 341 aaPredicted RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 FNIP1Q8TF40 1166 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 NSMCE3Q96MG7 304 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 ZNF599Q96NL3 588 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 TEX101Q9BY14 249 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 DPEP2Q9H4A9 486 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 CYP4F12Q9HCS2 524 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 PARVAQ9NVD7 372 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 TRNAU1APQ9NX07 287 aaKnown RBP16.52■□□□□ 0.24
TRIM29-221ENST00000627238 FOXJ2Q9P0K8 574 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 PCDHGA4Q9Y5G9 962 aa16.52■□□□□ 0.24
TRIM29-221ENST00000627238 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.23
TRIM29-221ENST00000627238 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 PSMD11O00231 422 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 B4GAT1O43505 415 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CCDC172P0C7W6 258 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 FERP16591 822 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 ERCC2P18074 760 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CR2P20023 1033 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SRSF6Q13247 344 aaKnown RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SQSTM1Q13501 440 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CA9Q16790 459 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 MANEAQ5SRI9 462 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 TMCO4Q5TGY1 634 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CLEC17AQ6ZS10 378 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CYP4V2Q6ZWL3 525 aaPredicted RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 APTXQ7Z2E3 356 aaKnown RBP16.51■□□□□ 0.23
TRIM29-221ENST00000627238 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 SFTPA2Q8IWL1 248 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 LZTR1Q8N653 840 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 ARFGAP1Q8N6T3 406 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 NPWQ8N729 165 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
TRIM29-221ENST00000627238 KCTD15Q96SI1 283 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms