RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TDRD5Q8NAT2 981 aaKnown RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 SP7Q8TDD2 431 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 STON2Q8WXE9 905 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 USP13Q92995 863 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 UTP4Q969X6 686 aaKnown RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 CCDC126Q96EE4 140 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 CCDC106Q9BWC9 280 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 TBC1D10AQ9BXI6 508 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 POPDC3Q9HBV1 291 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 GPAMQ9HCL2 828 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 HACD3Q9P035 362 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 CFAP97Q9P2B7 532 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 NPHS1O60500 1241 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 LPOP22079 712 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 ATP5F1P24539 256 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 SERPINB5P36952 375 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 RHOAP61586 193 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 PFKPQ01813 784 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 TRAF2Q12933 501 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 CSHL1Q14406 222 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 PTPRCAPQ14761 206 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 ACAP2Q15057 778 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 LINGO4Q6UY18 593 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 ZNF781Q8N8C0 355 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 LPCAT1Q8NF37 534 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 MDGA1Q8NFP4 955 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 TCF12Q99081 682 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 BTBD10Q9BSF8 475 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 C2orf49Q9BVC5 232 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 RPL26L1Q9UNX3 145 aaKnown RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 STK38LQ9Y2H1 464 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.11■■□□□ 1.13
PNKP-220ENST00000627232 PCDHGC4Q9Y5F7 938 aa22.11■■□□□ 1.13
PNKP-220ENST00000627232 CXorf51AA0A1B0GTR3 108 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 ANKRD66B4E2M5 251 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 BUD23O43709 281 aaKnown RBP22.1■■□□□ 1.13
PNKP-220ENST00000627232 FGF19O95750 216 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 GLUD1P00367 558 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 PDHA1P08559 390 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 SUOXP51687 545 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 STC1P52823 247 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 AP1S1P61966 158 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 FPGSQ05932 587 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 SLC20A2Q08357 652 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 PRKAA1Q13131 559 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 RETSATQ6NUM9 610 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 EPGNQ6UW88 154 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 LDB1Q86U70 411 aaPredicted RBP22.1■■□□□ 1.13
PNKP-220ENST00000627232 RNF135Q8IUD6 432 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 WFDC5Q8TCV5 224 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 MAGEC3Q8TD91 643 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 DDI1Q8WTU0 396 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 ACDQ96AP0 544 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 ASAH2Q9NR71 780 aa22.1■■□□□ 1.13
PNKP-220ENST00000627232 SLCO1B7G3V0H7 640 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 SCAMP3O14828 347 aaKnown RBP22.09■■□□□ 1.13
PNKP-220ENST00000627232 CCDC166P0CW27 439 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 HSPA8P11142 646 aaKnown RBP22.09■■□□□ 1.13
PNKP-220ENST00000627232 ALDH18A1P54886 795 aaKnown RBP22.09■■□□□ 1.13
PNKP-220ENST00000627232 CDKN2DP55273 166 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 CFAP157Q5JU67 520 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 METTL3Q86U44 580 aaKnown RBP22.09■■□□□ 1.13
PNKP-220ENST00000627232 LONP2Q86WA8 852 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 OR4K2Q8NGD2 314 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 RAD9AQ99638 391 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 TCF25Q9BQ70 676 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 ARMCX1Q9P291 453 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 TAGLN3Q9UI15 199 aa22.09■■□□□ 1.13
PNKP-220ENST00000627232 GBF1Q92538 1859 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 A0A1W2PRU2 124 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 WFS1O76024 890 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 PMLP29590 882 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 CSNK1DP48730 415 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 RPL14P50914 215 aaKnown RBP22.08■■□□□ 1.13
PNKP-220ENST00000627232 NAGLUP54802 743 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 SEMA3AQ14563 771 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 PPM1LQ5SGD2 360 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 ZNF549Q6P9A3 640 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 PIWIL4Q7Z3Z4 852 aaKnown RBP22.08■■□□□ 1.13
PNKP-220ENST00000627232 TREML1Q86YW5 311 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 BBS7Q8IWZ6 715 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 FIBINQ8TAL6 211 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 AARSD1Q9BTE6 412 aaKnown RBP22.08■■□□□ 1.13
PNKP-220ENST00000627232 KIAA1522Q9P206 1035 aaPredicted RBP22.08■■□□□ 1.13
PNKP-220ENST00000627232 VTI1BQ9UEU0 232 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 ARHGAP26Q9UNA1 814 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 VPS9D1Q9Y2B5 631 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 CRYL1Q9Y2S2 319 aa22.08■■□□□ 1.13
PNKP-220ENST00000627232 LEFTY2O00292 366 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 FZD6O60353 706 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 PIGNO95427 931 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 AOC1P19801 751 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 DDX6P26196 483 aaKnown RBP eCLIP22.07■■□□□ 1.12
PNKP-220ENST00000627232 BMPR1AP36894 532 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 ARL13AQ5H913 290 aaPredicted RBP22.07■■□□□ 1.12
PNKP-220ENST00000627232 METTL21CQ5VZV1 264 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 SUGP1Q8IWZ8 645 aaKnown RBP22.07■■□□□ 1.12
PNKP-220ENST00000627232 SPATA6LQ8N4H0 392 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 TTC30BQ8N4P2 665 aa22.07■■□□□ 1.12
PNKP-220ENST00000627232 TXNDC5Q8NBS9 432 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms