RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SLC7A4O43246 635 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 SPINT1O43278 529 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 PLRG1O43660 514 aaKnown RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 GPR37L1O60883 481 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ZNF217O75362 1048 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ELFN1P0C7U0 828 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 VIPR1P32241 457 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 MMP12P39900 470 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 SUOXP51687 545 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ADPRHP54922 357 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 DRG2P55039 364 aaKnown RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 TAS2R38P59533 333 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 CAV1Q03135 178 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ELP6Q0PNE2 266 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 SEPT6Q14141 434 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ARHGEF7Q14155 803 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 HLTFQ14527 1009 aaKnown RBP eCLIP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 POU6F1Q14863 301 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 CERCAMQ5T4B2 595 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 DENND2CQ68D51 928 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 DPPA4Q7L190 304 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 GLT6D1Q7Z4J2 308 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 TSPAN33Q86UF1 283 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 IFT20Q8IY31 132 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 MAML2Q8IZL2 1156 aaPredicted RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 OR14C36Q8NHC7 312 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 FBXO25Q8TCJ0 367 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 CXorf40AQ8TE69 158 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 RLN3Q8WXF3 142 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 PWWP2AQ96N64 755 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 MCCC1Q96RQ3 725 aaPredicted RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 WRAP53Q9BUR4 548 aaKnown RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 BTBD1Q9H0C5 482 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ARNT2Q9HBZ2 717 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 XAB2Q9HCS7 855 aaKnown RBP8.54□□□□□ -1.04
SGMS1-211ENST00000626236 GDF3Q9NR23 364 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 B4GALT6Q9UBX8 382 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 PPIL1Q9Y3C6 166 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 ZNF711Q9Y462 761 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 SPO11Q9Y5K1 396 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 FADS3Q9Y5Q0 445 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3DA0A087WVF3 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3IA0A087WXS9 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3EA0A087X179 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3KA0A087X1G2 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3FA6NER0 549 aaPredicted RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 LRRC72A6NJI9 287 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3LB9A6J9 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 AREL1O15033 823 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TSPAN6O43657 245 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 AP1G1O43747 822 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 PCDH8O95206 1070 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CLDN7O95471 211 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 IGLV3-19P01714 112 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3HP0C7X1 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 MLNP12872 115 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TDGF1P13385 188 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 LHCGRP22888 699 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 MGAT1P26572 445 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CD6P30203 668 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 OXTRP30559 389 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 ACSL1P33121 698 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 NPY2RP49146 381 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 FNTBP49356 437 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CARSP49589 748 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 ARL4CP56559 192 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CRADDP78560 199 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 RALGDSQ12967 914 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CUL1Q13616 776 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 HIF1AQ16665 826 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 ERCC6LQ2NKX8 1250 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CCDC38Q502W7 563 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 DNAJC21Q5F1R6 531 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 FNBP1LQ5T0N5 605 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3GQ6DHY5 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3CQ6IPX1 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 CRTC1Q6UUV9 634 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 ZDHHC24Q6UX98 284 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 LYSMD3Q7Z3D4 306 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TBC1D3Q8IZP1 549 aaPredicted RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 PDIK1LQ8N165 341 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 MPP5Q8N3R9 675 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 FRMD1Q8N878 549 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 PPHLN1Q8NEY8 458 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 FAM131CQ96AQ9 280 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
SGMS1-211ENST00000626236 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
SGMS1-211ENST00000626236 LYSMD1Q96S90 227 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms