RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PRKCGP05129 697 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 GIMD1P0DJR0 217 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 KELP23276 732 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 TRIM23P36406 574 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 PPARDQ03181 441 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 NFATC4Q14934 902 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 ESRP1Q6NXG1 681 aaKnown RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 ZCCHC8Q6NZY4 707 aaKnown RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 RCOR2Q8IZ40 523 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 CACTIN-AS1Q8N1I8 211 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 PIH1D2Q8WWB5 315 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 RNF25Q96BH1 459 aaPredicted RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 APOBEC3BQ9UH17 382 aaKnown RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 SALL4Q9UJQ4 1053 aa22.41■■□□□ 1.18
SF1-220ENST00000626028 KMT2BQ9UMN6 2715 aaPredicted RBP22.41■■□□□ 1.18
SF1-220ENST00000626028 USP24Q9UPU5 2620 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 SOWAHDA6NJG2 315 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 GOLGA8CPA6NN73 597 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 PDE2AO00408 941 aaPredicted RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 ZRANB2O95218 330 aaKnown RBP eCLIP22.4■■□□□ 1.181e-6■■■□□ 14.8
SF1-220ENST00000626028 MAP3K6O95382 1288 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 CKMT1AP12532 417 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 ZNF30P17039 623 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 DUSP3P51452 185 aaPredicted RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 KIAA1024LP59773 190 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 E2F1Q01094 437 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 ARHGEF7Q14155 803 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 ACOX1Q15067 660 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 TPRG1LQ5T0D9 272 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 MFSD7Q6UXD7 560 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 DAAM2Q86T65 1068 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 RFX6Q8HWS3 928 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 PHACTR4Q8IZ21 702 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 FSTL5Q8N475 847 aaPredicted RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 KDF1Q8NAX2 398 aaPredicted RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 EXD1Q8NHP7 514 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 ARRDC2Q8TBH0 407 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 RBM41Q96IZ5 413 aaKnown RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 LGMNQ99538 433 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 BAG1Q99933 345 aaPredicted RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 TDRD1Q9BXT4 1180 aaKnown RBP22.4■■□□□ 1.18
SF1-220ENST00000626028 KLF15Q9UIH9 416 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 CACNA1BQ00975 2339 aa22.4■■□□□ 1.18
SF1-220ENST00000626028 LMO7DNF2Z398 122 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 K7ESM1 405 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 TNFRSF10CO14798 259 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 MTSS1O43312 755 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 HLA-DQB2P05538 268 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 GP1BAP07359 652 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 TGM2P21980 687 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 TEAD1P28347 426 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 HNF1BP35680 557 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 HK3P52790 923 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 COPS2P61201 443 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 DNAJC3Q13217 504 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 SLC14A2Q15849 920 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 CNGA3Q16281 694 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 ZNF542PQ5EBM4 170 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 FAXCQ5TGI0 409 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 LVRNQ6Q4G3 990 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 LYSMD1Q96S90 227 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 HYOU1Q9Y4L1 999 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 DGKBQ9Y6T7 804 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 IGF2RP11717 2491 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 ASXL3Q9C0F0 2248 aa22.39■■□□□ 1.17
SF1-220ENST00000626028 ARHGEF17Q96PE2 2063 aaPredicted RBP22.38■■□□□ 1.17
SF1-220ENST00000626028 ZFC3H1O60293 1989 aaKnown RBP22.38■■□□□ 1.17
SF1-220ENST00000626028 A0A0J9YYE9 177 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 NPIPB15A6NHN6 443 aaPredicted RBP22.38■■□□□ 1.17
SF1-220ENST00000626028 CACNB4O00305 520 aaPredicted RBP22.38■■□□□ 1.17
SF1-220ENST00000626028 FFAR2O15552 330 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 PJA2O43164 708 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 RASGRP1O95267 797 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 JCHAINP01591 159 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 TRBC1P01850 177 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 TSHRP16473 764 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 GM2AP17900 193 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 EPHB1P54762 984 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 DAB2P98082 770 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 DSC2Q02487 901 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 DPTQ07507 201 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 AP1B1Q10567 949 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 PNCKQ6P2M8 343 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 SPOCD1Q6ZMY3 1216 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 NLRP8Q86W28 1048 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 GLMNQ92990 594 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 NUS1Q96E22 293 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 DTD2Q96FN9 168 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 WDR92Q96MX6 357 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 EFR3BQ9Y2G0 817 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 TTLL3Q9Y4R7 772 aa22.38■■□□□ 1.17
SF1-220ENST00000626028 GOLGA6L6A8MZA4 724 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 KCNK1O00180 336 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 PCCBP05166 539 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 PDHA1P08559 390 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 ALPIP09923 528 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 TNNT1P13805 278 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 LHCGRP22888 699 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 VAV2P52735 878 aa22.37■■□□□ 1.17
SF1-220ENST00000626028 SEMG2Q02383 582 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms