RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 KRT10P13645 584 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 CES1P23141 567 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 KELP23276 732 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 CCNCP24863 283 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 TRIM23P36406 574 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 GALNT2Q10471 571 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 TRAF2Q12933 501 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 IFI16Q16666 785 aaKnown RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 C6orf132Q5T0Z8 1188 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 ARMC12Q5T9G4 340 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 NCBP2-AS2Q69YL0 99 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 TIGD7Q6NT04 549 aaPredicted RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 GUSBP11Q6P575 273 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 C19orf48Q6RUI8 117 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 EFL1Q7Z2Z2 1120 aaKnown RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 GKN2Q86XP6 184 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 SLC35G2Q8TBE7 412 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 SCRN2Q96FV2 425 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 DEPDC7Q96QD5 511 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 CHP1Q99653 195 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 POLR1EQ9GZS1 481 aaKnown RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 NHEJ1Q9H9Q4 299 aaPredicted RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 NT5MQ9NPB1 228 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 HAUS2Q9NVX0 235 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 PADI4Q9UM07 663 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 DGKBQ9Y6T7 804 aa10.87□□□□□ -0.67
SSBP4-215ENST00000625926 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
SSBP4-215ENST00000625926 COL5A1P20908 1838 aaPredicted RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 A0A087WV48 116 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 PDE2AO00408 941 aaPredicted RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 TNFRSF10CO14798 259 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 HEXIM1O94992 359 aaKnown RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 PGLSO95336 258 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 MX2P20592 715 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 KDELR1P24390 212 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 VIPR1P32241 457 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 KIAA1024LP59773 190 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 ARHGEF7Q14155 803 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 MESDQ14696 234 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 CNGA3Q16281 694 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 DENND2CQ68D51 928 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 USP45Q70EL2 814 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 CNGA4Q8IV77 575 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 RHOT2Q8IXI1 618 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 SLC35F3Q8IY50 421 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 CBARPQ8N350 705 aaPredicted RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 PQLC3Q8N755 202 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 RAPGEF5Q92565 580 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 MAML1Q92585 1016 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 NAT6Q93015 286 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 FATE1Q969F0 183 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 FUBP1Q96AE4 644 aaKnown RBP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 FAF2Q96CS3 445 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 NUS1Q96E22 293 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 COQ10AQ96MF6 247 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 TSGA13Q96PP4 275 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 SEMA3CQ99985 751 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 WDR26Q9H7D7 661 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 RBM22Q9NW64 420 aaKnown RBP eCLIP10.86□□□□□ -0.67
SSBP4-215ENST00000625926 GULP1Q9UBP9 304 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 AMACRQ9UHK6 382 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 PPIL1Q9Y3C6 166 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 RAI2Q9Y5P3 530 aa10.86□□□□□ -0.67
SSBP4-215ENST00000625926 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 AKR1B15C9JRZ8 316 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 PSMD11O00231 422 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 FZD6O60353 706 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 USP12O75317 370 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 CSO75390 466 aaKnown RBP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 MTA2O94776 668 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 MAP3K6O95382 1288 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 CCNB1P14635 433 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 GM2AP17900 193 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 TGM2P21980 687 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ACTN2P35609 894 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ETV3P41162 512 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 GBE1Q04446 702 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ISXQ2M1V0 245 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 HSD11B1LQ7Z5J1 315 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ARL10Q8N8L6 244 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 CCNYQ8ND76 341 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 WDR48Q8TAF3 677 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 PIH1D2Q8WWB5 315 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 GRAMD1AQ96CP6 724 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 RNF157Q96PX1 679 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 MCCC1Q96RQ3 725 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 RBM15Q96T37 977 aaKnown RBP eCLIP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 ANP32EQ9BTT0 268 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 LGR4Q9BXB1 951 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
SSBP4-215ENST00000625926 SPTLC3Q9NUV7 552 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms