RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 XKRYO14609 159 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TRDMT1O14717 391 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 UBDO15205 165 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CHI3L2Q15782 390 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 PTPRNQ16849 979 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 UBXN11Q5T124 520 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 RTL4Q6ZR62 310 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 SLC9A9Q8IVB4 645 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 GJD3Q8N144 294 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TPCN2Q8NHX9 752 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 NSMCE3Q96MG7 304 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TMEM27Q9HBJ8 222 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CYP4F12Q9HCS2 524 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 AIM2O14862 343 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 PAGE1O75459 146 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 C22orf31O95567 290 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 NDST3O95803 873 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CCND3P30281 292 aaPredicted RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 DYNC1I2Q13409 638 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 MBLAC2Q68D91 279 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CAMKVQ8NCB2 501 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TCRBV5S4A2TA0A5A2 114 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 PI15O43692 258 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 TOP3BO95985 862 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 SLC7A1P30825 629 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 WDR59Q6PJI9 974 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 C1orf186Q6ZWK4 172 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 SNX20Q7Z614 316 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 ZNF461Q8TAF7 563 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 DDX18Q9NVP1 670 aaKnown RBP11.11□□□□□ -0.63
VPS8-227ENST00000625842 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
VPS8-227ENST00000625842 HSPA13P48723 471 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MAPK10P53779 464 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 SMU1Q2TAY7 513 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MLIPQ5VWP3 458 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 OVCA2Q8WZ82 227 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 SHC3Q92529 594 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MR1Q95460 341 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 KCNMB3Q9NPA1 279 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MID1IP1Q9NPA3 183 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 WNT9AO14904 365 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 DUX1O43812 170 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 NT5EP21589 574 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 PKP1Q13835 747 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 CRYMQ14894 314 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 LRRC14Q15048 493 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ZNF621Q6ZSS3 439 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 TPRG1Q6ZUI0 275 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 EPHX4Q8IUS5 362 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 NACC2Q96BF6 587 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 RNFT2Q96EX2 444 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 RUVBL1Q9Y265 456 aaKnown RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 TSPAN1O60635 241 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 LTA4HP09960 611 aaKnown RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 BMP4P12644 408 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MYL12AP19105 171 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 CACNG1Q06432 222 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 LARS2Q15031 903 aaKnown RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 ADGRA1Q86SQ6 560 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 TMEM126BQ8IUX1 230 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MICU2Q8IYU8 434 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 RNF168Q8IYW5 571 aaPredicted RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 AADATQ8N5Z0 425 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ATG16L2Q8NAA4 619 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ZSCAN4Q8NAM6 433 aaPredicted RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 KLHL5Q96PQ7 755 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS8-227ENST00000625842 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 EVLQ9UI08 416 aaPredicted RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 GMNCA6NCL1 334 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 DLX3O60479 287 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 CSF2RAP15509 400 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
VPS8-227ENST00000625842 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 OR4L1Q8NH43 312 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 SMARCD2Q92925 531 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 NUS1Q96E22 293 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 CCM2Q9BSQ5 444 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 ADAM7Q9H2U9 754 aa11.1□□□□□ -0.63
VPS8-227ENST00000625842 SIRPGQ9P1W8 387 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms