RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TTC27Q6P3X3 843 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 GCNT7Q6ZNI0 430 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-217ENST00000621474 CEP76Q8TAP6 659 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 MAIP1Q8WWC4 291 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 ASB12Q8WXK4 309 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 AP1M1Q9BXS5 423 aa14.36□□□□□ -0.11
CBWD3-217ENST00000621474 POM121BA6NF01 834 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 PRAMEF26H0Y7S4 382 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 PGRMC1O00264 195 aaKnown RBP14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CFIP05156 583 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 ELFN1P0C7U0 828 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 ETS1P14921 441 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 GNSP15586 552 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CA4P22748 312 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 VIPR1P32241 457 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 NUDT1P36639 197 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CHRNA4P43681 627 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CLDN2P57739 230 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 PTSQ03393 145 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 MPP3Q13368 585 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 P3H1Q32P28 736 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 LRRC66Q68CR7 880 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 ITPRIPL1Q6GPH6 555 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CRTC1Q6UUV9 634 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 USP45Q70EL2 814 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 RABEPKQ7Z6M1 372 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CREG2Q8IUH2 290 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 PAF1Q8N7H5 531 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 EID2BQ96D98 161 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 BMFQ96LC9 184 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 COQ10AQ96MF6 247 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 LENG8Q96PV6 779 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-217ENST00000621474 FERMT1Q9BQL6 677 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 MBNL1Q9NR56 388 aaKnown RBP14.35□□□□□ -0.11
CBWD3-217ENST00000621474 GPR27Q9NS67 375 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 SLC6A14Q9UN76 642 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 ZNF148Q9UQR1 794 aa14.35□□□□□ -0.11
CBWD3-217ENST00000621474 DRG1Q9Y295 367 aaKnown RBP14.35□□□□□ -0.11
CBWD3-217ENST00000621474 CTAGE9A4FU28 777 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 PRR5-ARHGAP8B1AHC4 643 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 KHNYNO15037 678 aaKnown RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 GDF9O60383 454 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 ZNF189O75820 626 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 STK10O94804 968 aaKnown RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 NDST3O95803 873 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 CD38P28907 300 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 ADRA1AP35348 466 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 IGFALSP35858 605 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 EPHB1P54762 984 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 GRIK2Q13002 908 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 FAXCQ5TGI0 409 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 HSD11B1LQ7Z5J1 315 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 SLC22A18ASQ8N1D0 253 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 PELI3Q8N2H9 469 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 C12orf50Q8NA57 414 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-217ENST00000621474 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 ADGRE3Q9BY15 652 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 BPTFQ12830 3046 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 LRP4O75096 1905 aa14.34□□□□□ -0.11
CBWD3-217ENST00000621474 A0A1B0GVT2 93 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 CDX4O14627 284 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-217ENST00000621474 VILLO15195 856 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 RECQL5O94762 991 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-217ENST00000621474 IFNB1P01574 187 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 EPOP01588 193 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 C1SP09871 688 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 PIRTP0C851 137 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 ZSCAN5DPP0CG00 497 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 CYP2A6P11509 494 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-217ENST00000621474 ENGP17813 658 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 MSLNQ13421 630 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-217ENST00000621474 SLC1A5Q15758 541 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 PARP6Q2NL67 630 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 WSCD2Q2TBF2 565 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 SIRPB2Q5JXA9 342 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 RANBP10Q6VN20 620 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 ARHGEF18Q6ZSZ5 1173 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 RFLNAQ6ZTI6 216 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 KIAA2013Q8IYS2 634 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 DENND6BQ8NEG7 585 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 RMDN1Q96DB5 314 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 AASDHPPTQ9NRN7 309 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 SPO11Q9Y5K1 396 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 SAR1BQ9Y6B6 198 aa14.33□□□□□ -0.11
CBWD3-217ENST00000621474 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.11
CBWD3-217ENST00000621474 PSMD11O00231 422 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 PDE2AO00408 941 aaPredicted RBP14.33□□□□□ -0.12
CBWD3-217ENST00000621474 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 AURKAO14965 403 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 ANXA9O76027 345 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 CLDN7O95471 211 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms