RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 YBEYP58557 167 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FNBP1LQ5T0N5 605 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 UNC5AQ6ZN44 842 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SUN3Q8TAQ9 357 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 MTERF3Q96E29 417 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 LMLNQ96KR4 655 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 UGT2B28Q9BY64 529 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM83DQ9H4H8 585 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 C10orf88Q9H8K7 445 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 THAP1Q9NVV9 213 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 MRASO14807 208 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CD3EAPO15446 510 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 OTCP00480 354 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ASLP04424 464 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FLT3P36888 993 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ABCG1P45844 678 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 NEK3P51956 506 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ATP6V0D1P61421 351 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 LSM12Q3MHD2 195 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 TBCELQ5QJ74 424 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 PHF13Q86YI8 300 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 TMPRSS6Q8IU80 811 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM71AQ8IYT1 594 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SRFBP1Q8NEF9 429 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 AGAP11Q8TF27 550 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 LCN9Q8WX39 176 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CERS2Q96G23 380 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 PPP3R2Q96LZ3 170 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 REXO4Q9GZR2 422 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 C3orf14Q9HBI5 128 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC9A8Q9Y2E8 581 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 RHOQP17081 205 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 LBPP18428 481 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 MYL12AP19105 171 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 VARSP26640 1264 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 GPD2P43304 727 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 LBX1P52954 281 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 NEK5Q6P3R8 708 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 C11orf88Q6PI97 169 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 UBE2R2Q712K3 238 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 STRADAQ7RTN6 431 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ARHGAP22Q7Z5H3 698 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC41A1Q8IVJ1 513 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF563Q8TA94 476 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM192AQ9GZU8 254 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 TNKS2Q9H2K2 1166 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 PCDH12Q9NPG4 1184 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CYLDQ9NQC7 956 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ADAM30Q9UKF2 790 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ANGPT4Q9Y264 503 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 AP4S1Q9Y587 144 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SMIM31A0A1B0GVY4 71 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC38A8A6NNN8 435 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 SNX3O60493 162 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 TFEBP19484 476 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CMPK1P30085 196 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CCR3P51677 355 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 TAS2R50P59544 299 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CYP4F8P98187 520 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 FRG1Q14331 258 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 APTXQ7Z2E3 356 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 NMD3Q96D46 503 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 AGO3Q9H9G7 860 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 RNPEPL1Q9HAU8 725 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 KLHL1Q9NR64 748 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 GTF2IRD1Q9UHL9 959 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 RAI2Q9Y5P3 530 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 ACTL7BQ9Y614 415 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CPED1A4D0V7 1026 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 PEX1O43933 1283 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 KCNH1O95259 989 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SPAM1P38567 509 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 IL5RAQ01344 420 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TBC1D25Q3MII6 688 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CD101Q93033 1021 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 HDAC10Q969S8 669 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 LGMNQ99538 433 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 BDH2Q9BUT1 245 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MYLK2Q9H1R3 596 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ACP6Q9NPH0 428 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SAR1AQ9NR31 198 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 LYVE1Q9Y5Y7 322 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 FASP25445 335 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ADRA1BP35368 520 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 NRIP1P48552 1158 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ARRB1P49407 418 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TXNDC11Q6PKC3 985 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 POTEHQ6S545 545 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 GPR141Q7Z602 305 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ZC3H7AQ8IWR0 971 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SETD7Q8WTS6 366 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SHC3Q92529 594 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 LINGO1Q96FE5 620 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MFSD14AQ96MC6 490 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 NDNQ99608 321 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC25A23Q9BV35 468 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 RACGAP1Q9H0H5 632 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms