RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 CPT1BQ92523 772 aa19.77■□□□□ 0.76
UPF3A-211ENST00000618700 ZC3H10Q96K80 434 aaKnown RBP19.77■□□□□ 0.76
UPF3A-211ENST00000618700 DUSP15Q9H1R2 295 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-211ENST00000618700 R4GN57 208 aa19.77■□□□□ 0.76
UPF3A-211ENST00000618700 TCRBV7S3A2A0A539 114 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 PRR23AA6NEV1 266 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 TMEM63AO94886 807 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 HEXIM1O94992 359 aaKnown RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 PCDH8O95206 1070 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 PIRTP0C851 137 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 CYP2A6P11509 494 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 ADCY8P40145 1251 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 MRPS25P82663 173 aaKnown RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 CNGA3Q16281 694 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 ZNF284Q2VY69 593 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 RNASEH2BQ5TBB1 312 aaKnown RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 SEL1L3Q68CR1 1132 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 LIPIQ6XZB0 460 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 LINC00523Q86TU6 105 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 TSPAN33Q86UF1 283 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 SLC41A1Q8IVJ1 513 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 NOA1Q8NC60 698 aaKnown RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 CARD6Q9BX69 1037 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 EPC1Q9H2F5 836 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 MAGEE1Q9HCI5 957 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 TPX2Q9ULW0 747 aaKnown RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-211ENST00000618700 PCDHGA4Q9Y5G9 962 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 SPO11Q9Y5K1 396 aa19.76■□□□□ 0.75
UPF3A-211ENST00000618700 VPS13AQ96RL7 3174 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 ABCA7Q8IZY2 2146 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 A0A1W2PQU0 124 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 METTL12A8MUP2 240 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 DNALI1O14645 258 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 C6P13671 934 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 ZNF30P17039 623 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 LMAN1P49257 510 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 LIG3P49916 1009 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 RPS21P63220 83 aaKnown RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 MSLNQ13421 630 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 ANKRD22Q5VYY1 191 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 C8orf74Q6P047 294 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 ZNF534Q76KX8 674 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 CEP68Q76N32 757 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 LPCAT2Q7L5N7 544 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 CBARPQ8N350 705 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 NAT8LQ8N9F0 302 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 CXorf40AQ8TE69 158 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 FOXJ1Q92949 421 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 SRPK1Q96SB4 655 aaKnown RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 WRAP53Q9BUR4 548 aaKnown RBP19.75■□□□□ 0.75
UPF3A-211ENST00000618700 C1QTNF2Q9BXJ5 285 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 CASS4Q9NQ75 786 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 ZNF711Q9Y462 761 aa19.75■□□□□ 0.75
UPF3A-211ENST00000618700 SPAG17Q6Q759 2223 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 A0A0U1RQS6 177 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 A8MX80 341 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 PSMD11O00231 422 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 MMP20O60882 483 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 ELFN1P0C7U0 828 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 GM2AP17900 193 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 GRIA1P42261 906 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 STC1P52823 247 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 CDH17Q12864 832 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 FGL2Q14314 439 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 ELF2Q15723 593 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 LRRC66Q68CR7 880 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 LYSMD3Q7Z3D4 306 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 PPIL6Q8IXY8 311 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 TMEFF1Q8IYR6 380 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 OR52K1Q8NGK4 314 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 ASB12Q8WXK4 309 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 BIRC7Q96CA5 298 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 HSPA12BQ96MM6 686 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 ERP44Q9BS26 406 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 TRABDQ9H4I3 376 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 HACD3Q9P035 362 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 LRRK1Q38SD2 2015 aa19.74■□□□□ 0.75
UPF3A-211ENST00000618700 C1orf232A0A0U1RR37 186 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 IGLON5A6NGN9 336 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 EFCAB8A8MWE9 144 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 SEC31AO94979 1220 aaKnown RBP19.73■□□□□ 0.75
UPF3A-211ENST00000618700 FSBPO95073 299 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 PTGER3P43115 390 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 TERF1P54274 439 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 CREB5Q02930 508 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 ARHGEF7Q14155 803 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 SIM2Q14190 667 aaPredicted RBP19.73■□□□□ 0.75
UPF3A-211ENST00000618700 AGERQ15109 404 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 IZUMO3Q5VZ72 239 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 DUPD1Q68J44 220 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 PPP1R21Q6ZMI0 780 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 HOOK3Q86VS8 718 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 TTC30BQ8N4P2 665 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 DEFB119Q8N690 84 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 MCUQ8NE86 351 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 PTCD2Q8WV60 388 aaKnown RBP19.73■□□□□ 0.75
UPF3A-211ENST00000618700 EID2BQ96D98 161 aa19.73■□□□□ 0.75
UPF3A-211ENST00000618700 COQ10AQ96MF6 247 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms