RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CBR4Q8N4T8 237 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 CALML6Q8TD86 181 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 ROPN1LQ96C74 230 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 TINF2Q9BSI4 451 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 TBC1D13Q9NVG8 400 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 SMOXQ9NWM0 555 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 HACD3Q9P035 362 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 PTGDR2Q9Y5Y4 395 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 GMEB1Q9Y692 573 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 COL4A4P53420 1690 aaPredicted RBP20.45■□□□□ 0.86
NEK3-208ENST00000618534 A0A0J9YYE9 177 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 FAM149AA5PLN7 773 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 IRAK2O43187 625 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 BMP10O95393 424 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 UNC50Q53HI1 259 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 TBCELQ5QJ74 424 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 ARTNQ5T4W7 220 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 MANEALQ5VSG8 457 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 IRAK1BP1Q5VVH5 260 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 IL31Q6EBC2 164 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 KDELC1Q6UW63 502 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 EPHX4Q8IUS5 362 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 SCAMP5Q8TAC9 235 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 GAD1Q99259 594 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 GPATCH1Q9BRR8 931 aaKnown RBP20.45■□□□□ 0.86
NEK3-208ENST00000618534 TRMOQ9BU70 441 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 CATSPERBQ9H7T0 1116 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 AKTIPQ9H8T0 292 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 MAP10Q9P2G4 905 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 VWA7Q9Y334 891 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 CROCCQ5TZA2 2017 aa20.45■□□□□ 0.86
NEK3-208ENST00000618534 C9JVG2 144 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 DLGAP1O14490 977 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 FGF10O15520 208 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 HOXC13P31276 330 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 CRYBB1P53674 252 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 CDH13P55290 713 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 PCYOX1LQ8NBM8 494 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 OR13J1Q8NGT2 312 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 EXT2Q93063 718 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 L3HYPDHQ96EM0 354 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 FCRL2Q96LA5 508 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 PPP1R2P1Q96PQ5 205 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 RTP3Q9BQQ7 232 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 CCM2LQ9NUG4 571 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 MPP6Q9NZW5 540 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 EGFL7Q9UHF1 273 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 EIF4EBP2Q13542 120 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 UGT3A2Q3SY77 523 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 PRAMEF19Q5SWL8 479 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 TIGD7Q6NT04 549 aaPredicted RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 ISCA2Q86U28 154 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 SPPL2CQ8IUH8 684 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 CILP2Q8IUL8 1156 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 LZTR1Q8N653 840 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 PAAF1Q9BRP4 392 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 DNAAF2Q9NVR5 837 aaKnown RBP20.44■□□□□ 0.86
NEK3-208ENST00000618534 MIOSQ9NXC5 875 aa20.44■□□□□ 0.86
NEK3-208ENST00000618534 MIA3Q5JRA6 1907 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 TPST1O60507 370 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 TMED1Q13445 227 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 VPS26BQ4G0F5 336 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 GPR142Q7Z601 462 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 ZNF786Q8N393 782 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 PTERQ96BW5 349 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 BIRC8Q96P09 236 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 CASTOR2A6NHX0 329 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 PDHXO00330 501 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 PPP6CO00743 305 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 WISP3O95389 354 aaPredicted RBP20.43■□□□□ 0.86
NEK3-208ENST00000618534 CAPN3P20807 821 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 SERPINH1P50454 418 aaKnown RBP20.43■□□□□ 0.86
NEK3-208ENST00000618534 YBX1P67809 324 aaKnown RBP20.43■□□□□ 0.86
NEK3-208ENST00000618534 SH3BP2P78314 561 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 CAPRIN1Q14444 709 aaKnown RBP20.43■□□□□ 0.86
NEK3-208ENST00000618534 KCTD21Q4G0X4 260 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 MFSD2AQ8NA29 543 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 LZICQ8WZA0 190 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 ZUFSPQ96AP4 578 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 SLC38A7Q9NVC3 462 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 ABCD2Q9UBJ2 740 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 EBF1Q9UH73 591 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 DSEQ9UL01 958 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 DNAJC15Q9Y5T4 150 aa20.43■□□□□ 0.86
NEK3-208ENST00000618534 DHRS12A0PJE2 317 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 BBIP1A8MTZ0 92 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 MOCS2O96007 188 aaPredicted RBP20.42■□□□□ 0.86
NEK3-208ENST00000618534 PCSK1P29120 753 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 PGFP49763 221 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 ARSDP51689 593 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 MAXP61244 160 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 GPR141Q7Z602 305 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 CLVS1Q8IUQ0 354 aaPredicted RBP20.42■□□□□ 0.86
NEK3-208ENST00000618534 OR6P1Q8NGX9 317 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 GTF3C2Q8WUA4 911 aaPredicted RBP20.42■□□□□ 0.86
NEK3-208ENST00000618534 LPPQ93052 612 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 ABTB1Q969K4 478 aaPredicted RBP20.42■□□□□ 0.86
NEK3-208ENST00000618534 TMLHEQ9NVH6 421 aa20.42■□□□□ 0.86
NEK3-208ENST00000618534 MARCH4Q9P2E8 410 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms