RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 RD3Q7Z3Z2 195 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 RHOT2Q8IXI1 618 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 SDR16C5Q8N3Y7 309 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 MAPK15Q8TD08 544 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 FATE1Q969F0 183 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 DEPDC7Q96QD5 511 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 SPTLC3Q9NUV7 552 aa25.28■■□□□ 1.64
VEGFA-228ENST00000617771 CPED1A4D0V7 1026 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 EME2A4GXA9 379 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-228ENST00000617771 MATN3O15232 486 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 YY2O15391 372 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 PGLSO95336 258 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 TNFP01375 233 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 HOXC4P09017 264 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-228ENST00000617771 CES1P23141 567 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 CCNCP24863 283 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 CNGA3Q16281 694 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 CDCP2Q5VXM1 449 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 GUSBP11Q6P575 273 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 LVRNQ6Q4G3 990 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 USP45Q70EL2 814 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 NDUFAF2Q8N183 169 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 MAML1Q92585 1016 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 COQ10AQ96MF6 247 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 TSGA13Q96PP4 275 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 SEMA3CQ99985 751 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 AMACRQ9UHK6 382 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 GPSM3Q9Y4H4 160 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 RAI2Q9Y5P3 530 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 DMXL2Q8TDJ6 3036 aa25.27■■□□□ 1.64
VEGFA-228ENST00000617771 AKR1B15C9JRZ8 316 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-228ENST00000617771 HEXIM1O94992 359 aaKnown RBP25.26■■□□□ 1.63
VEGFA-228ENST00000617771 MAP3K6O95382 1288 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 KRT10P13645 584 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 GM2AP17900 193 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 KDELR1P24390 212 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 GKN2Q86XP6 184 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 SLC35F3Q8IY50 421 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 OR56A4Q8NGH8 313 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 TPCN2Q8NHX9 752 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 NAT6Q93015 286 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 FUBP1Q96AE4 644 aaKnown RBP25.26■■□□□ 1.63
VEGFA-228ENST00000617771 NUS1Q96E22 293 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 SCRN2Q96FV2 425 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 ZNF830Q96NB3 372 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-228ENST00000617771 WDR26Q9H7D7 661 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 DGKBQ9Y6T7 804 aa25.26■■□□□ 1.63
VEGFA-228ENST00000617771 GOLGA4Q13439 2230 aaKnown RBP25.25■■□□□ 1.63
VEGFA-228ENST00000617771 PSMD11O00231 422 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 PDE2AO00408 941 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-228ENST00000617771 MTA2O94776 668 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 CELA2BP08218 269 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-228ENST00000617771 TRIM23P36406 574 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 ARHGEF7Q14155 803 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 PNCKQ6P2M8 343 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 PQLC3Q8N755 202 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 RAPGEF5Q92565 580 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 RBM22Q9NW64 420 aaKnown RBP eCLIP25.25■■□□□ 1.634e-11■■■■□ 26.1
VEGFA-228ENST00000617771 PPIL1Q9Y3C6 166 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 TTLL3Q9Y4R7 772 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 ZZEF1O43149 2961 aa25.25■■□□□ 1.63
VEGFA-228ENST00000617771 CFAP47Q6ZTR5 3102 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 TNFRSF10CO14798 259 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 GBE1Q04446 702 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 DENND2CQ68D51 928 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 ALG1LQ6GMV1 187 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 ARL10Q8N8L6 244 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 HDAC11Q96DB2 347 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 DTD2Q96FN9 168 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 PDXPQ96GD0 296 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 RNF157Q96PX1 679 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 MCCC1Q96RQ3 725 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-228ENST00000617771 INTUQ9ULD6 942 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 LHX6Q9UPM6 363 aa25.24■■□□□ 1.63
VEGFA-228ENST00000617771 LRRD1A4D1F6 860 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 TMEM202A6NGA9 273 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 NPIPB15A6NHN6 443 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-228ENST00000617771 ZNF487B1APH4 448 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 CCNB1P14635 433 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 CA4P22748 312 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 LHCGRP22888 699 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 TBX2Q13207 712 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-228ENST00000617771 TCEA2Q15560 299 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 SARM1Q6SZW1 724 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 VSIG1Q86XK7 387 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 CCNYQ8ND76 341 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-228ENST00000617771 PIH1D2Q8WWB5 315 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 OR1E3Q8WZA6 343 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 RBM15Q96T37 977 aaKnown RBP eCLIP25.23■■□□□ 1.631e-8■■□□□ 12.7
VEGFA-228ENST00000617771 TRIM5Q9C035 493 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 DTLQ9NZJ0 730 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 PADI4Q9UM07 663 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 SHROOM3Q8TF72 1996 aa25.23■■□□□ 1.63
VEGFA-228ENST00000617771 FZD6O60353 706 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 CSO75390 466 aaKnown RBP25.22■■□□□ 1.63
VEGFA-228ENST00000617771 CTPS1P17812 591 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 TGM2P21980 687 aa25.22■■□□□ 1.63
VEGFA-228ENST00000617771 EPHB1P54762 984 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms