RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 HCAR3P49019 387 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 NOMO2Q5JPE7 1267 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 KHDC1LQ5JSQ8 128 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 TRIM40Q6P9F5 258 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 AFTPHQ6ULP2 937 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 LRRC6Q86X45 466 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 LCN9Q8WX39 176 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 BPIFA1Q9NP55 256 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ERGIC3Q9Y282 383 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 PP2D1A8MPX8 630 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 HRGP04196 525 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ALOX5P09917 674 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-248ENST00000616053 UNC5BQ8IZJ1 945 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ABCC13Q9NSE7 274 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 CDC14AQ9UNH5 594 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 NPR3P17342 541 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 CDH17Q12864 832 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 SNAPC1Q16533 368 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 CEP97Q8IW35 865 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ZCCHC10Q8TBK6 192 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 GAD1Q99259 594 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ZYG11BQ9C0D3 744 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 HAT1O14929 419 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 KLHL41O60662 606 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 BCAS1O75363 584 aaPredicted RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 OR3A3P47888 321 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 OR3A2P47893 321 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 CTBP2P56545 445 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 RASGEF1CQ8N431 466 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 TMEM161BQ8NDZ6 487 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 DCAKDQ8WVC6 231 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ING5Q8WYH8 240 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 TMEM176AQ96HP8 235 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ATP6V1G3Q96LB4 118 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 FCRL4Q96PJ5 515 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 NDC1Q9BTX1 674 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 SPATC1LQ9H0A9 340 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 SLC6A15Q9H2J7 730 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 ARHGEF33A8MVX0 844 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 KAT7O95251 611 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 GSTT2BP0CG30 244 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-248ENST00000616053 TARBP2Q15633 366 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 ZNF470Q6ECI4 717 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 RAVER1Q8IY67 606 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 ALDH16A1Q8IZ83 802 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 FBXW5Q969U6 566 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 TP53INP1Q96A56 240 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 EPB41L1Q9H4G0 881 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 OSBPL3Q9H4L5 887 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 C12orf4Q9NQ89 552 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 KLRF1Q9NZS2 232 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 OAS3Q9Y6K5 1087 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 B4DGG1 531 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 PPM1BO75688 479 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 UGT1A1P22309 533 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ENTPD1P49961 510 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 GALK2Q01415 458 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
TCF4-248ENST00000616053 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-248ENST00000616053 Q8N9G6 341 aaPredicted RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 NUSAP1Q9BXS6 441 aaKnown RBP12.67□□□□□ -0.38
TCF4-248ENST00000616053 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZNF565Q8N9K5 539 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 OR4A15Q8NGL6 344 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 RIT2Q99578 217 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 GPN1Q9HCN4 374 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 NFASCO94856 1347 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PLOD2O00469 737 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 MSL3P1P0C860 447 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 INSRRP14616 1297 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CREB1P16220 341 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CRABP2P29373 138 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 HERVK_113P62684 666 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 S100ZQ8WXG8 99 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 C17orf75Q9HAS0 396 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 HIF1ANQ9NWT6 349 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PLCL2Q9UPR0 1127 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 FFAR2O15552 330 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 LAG3P18627 525 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 RYKP34925 604 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms