RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PRKCHP24723 683 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 PTPN9P43378 593 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 NME3Q13232 169 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 IYDQ6PHW0 289 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 VASH1Q7L8A9 365 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-219ENST00000615335 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-219ENST00000615335 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
FOXN3-219ENST00000615335 PQLC3Q8N755 202 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 THAP11Q96EK4 314 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-219ENST00000615335 TBCBQ99426 244 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 MAN1C1Q9NR34 630 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 PLLPQ9Y342 182 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 IFT52Q9Y366 437 aa13.15□□□□□ -0.3
FOXN3-219ENST00000615335 M0QYT0 321 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 KPNA4O00629 521 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-219ENST00000615335 APRTP07741 180 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 IL4RP24394 825 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 ERFP50548 548 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PITX1P78337 314 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-219ENST00000615335 KDSRQ06136 332 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 ATG16L1Q676U5 607 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 OR7G1Q8NGA0 311 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 RNF139Q8WU17 664 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 OSER1Q9NX31 292 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 NUDT5Q9UKK9 219 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 STAMBPO95630 424 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 EPCAMP16422 314 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 HMGA1P17096 107 aaKnown RBP13.14□□□□□ -0.31
FOXN3-219ENST00000615335 MAGEA6P43360 314 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 TMPRSS15P98073 1019 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 ATP1A4Q13733 1029 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 MOGQ16653 247 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PPM1LQ5SGD2 360 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 EGFLAMQ63HQ2 1017 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 TERB1Q8NA31 727 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PCDH19Q8TAB3 1148 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 CALML6Q8TD86 181 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 E2F7Q96AV8 911 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 LRGUKQ96M69 825 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 NPY6RQ99463 290 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 MECRQ9BV79 373 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 TDRD1Q9BXT4 1180 aaKnown RBP13.14□□□□□ -0.31
FOXN3-219ENST00000615335 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-219ENST00000615335 PSMD13Q9UNM6 376 aa13.14□□□□□ -0.31
FOXN3-219ENST00000615335 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 KRT75O95678 551 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 SLC9A4Q6AI14 798 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 AMIGO2Q86SJ2 522 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 C14orf80Q86SX3 495 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 POU5F2Q8N7G0 328 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MCUQ8NE86 351 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ADCY4Q8NFM4 1077 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CENPIQ92674 756 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 C7orf26Q96N11 449 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 SLC13A1Q9BZW2 595 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 PPARGC1AQ9UBK2 798 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 HEMK1Q9Y5R4 338 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 HCFC2Q9Y5Z7 792 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CCL16O15467 120 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 RFPL1O75677 317 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 RFPL2O75678 378 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 JAK1P23458 1154 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CPOXP36551 454 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 NRIP1P48552 1158 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CSE1LP55060 971 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ESRRGP62508 458 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 BST1Q10588 318 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 BMPR2Q13873 1038 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ITPRIPL1Q6GPH6 555 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 C4orf22Q6V702 233 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 STRADAQ7RTN6 431 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ALYREFQ86V81 257 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 GPR180Q86V85 440 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CDKL3Q8IVW4 592 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ATP6V0D2Q8N8Y2 350 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms