RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 N4BP2L1Q5TBK1 243 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-211ENST00000615061 CCDC181Q5TID7 509 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 KDELC2Q7Z4H8 507 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 PELI3Q8N2H9 469 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 PLA2G15Q8NCC3 412 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 SPATA22Q8NHS9 363 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 ACTL9Q8TC94 416 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 RHBDD1Q8TEB9 315 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 SCRN2Q96FV2 425 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 HES6Q96HZ4 224 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 QKIQ96PU8 341 aaKnown RBP eCLIP16.78■□□□□ 0.28
CBWD3-211ENST00000615061 MCCC1Q96RQ3 725 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-211ENST00000615061 PCDHGB2Q9Y5G2 931 aa16.78■□□□□ 0.28
CBWD3-211ENST00000615061 KNTC1P50748 2209 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 A0A1W2PQ67 120 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 F5H423 210 aaPredicted RBP16.77■□□□□ 0.28
CBWD3-211ENST00000615061 FLRT2O43155 660 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
CBWD3-211ENST00000615061 PCCBP05166 539 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 VIPR1P32241 457 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 CD68P34810 354 aaPredicted RBP16.77■□□□□ 0.28
CBWD3-211ENST00000615061 PTPN7P35236 360 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 HNF1BP35680 557 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 RABIFP47224 123 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 RXRGP48443 463 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 ACOX1Q15067 660 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 NYAP1Q6ZVC0 841 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 UBL4BQ8N7F7 174 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 LPCAT1Q8NF37 534 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 IMP4Q96G21 291 aaKnown RBP16.77■□□□□ 0.28
CBWD3-211ENST00000615061 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 C1QTNF7Q9BXJ2 289 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 PCDH9Q9HC56 1237 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 HAUS2Q9NVX0 235 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 KLF15Q9UIH9 416 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 PNMA8BQ9ULN7 279 aaPredicted RBP16.77■□□□□ 0.28
CBWD3-211ENST00000615061 EFR3BQ9Y2G0 817 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 PPIL1Q9Y3C6 166 aa16.77■□□□□ 0.28
CBWD3-211ENST00000615061 A0A0J9YYE9 177 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 SPTY2D1-AS1A0A0U1RR47 76 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 MIF4GDA9UHW6 222 aaKnown RBP16.77■□□□□ 0.27
CBWD3-211ENST00000615061 MT-CYBP00156 380 aaPredicted RBP16.77■□□□□ 0.27
CBWD3-211ENST00000615061 TRBC1P01850 177 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 EPHB1P54762 984 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.27
CBWD3-211ENST00000615061 INPP5AQ14642 412 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 SUZ12Q15022 739 aaKnown RBP16.77■□□□□ 0.27
CBWD3-211ENST00000615061 AGERQ15109 404 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 HSD11B1LQ7Z5J1 315 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 GLOD4Q9HC38 313 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 UCKL1Q9NWZ5 548 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 DNAJC28Q9NX36 388 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 UBP1Q9NZI7 540 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 OR1A2Q9Y585 309 aa16.77■□□□□ 0.27
CBWD3-211ENST00000615061 CFAP69A5D8W1 941 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 H7C0C1 242 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 ITGAVP06756 1048 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 RBL1P28749 1068 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 ETV3P41162 512 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 ATP5OP48047 213 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 TRIP6Q15654 476 aaKnown RBP16.76■□□□□ 0.27
CBWD3-211ENST00000615061 PCSK7Q16549 785 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 RFLNAQ6ZTI6 216 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 USP45Q70EL2 814 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 KANSL1Q7Z3B3 1105 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 ZNF567Q8N184 647 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 OXR1Q8N573 874 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 BAHD1Q8TBE0 780 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-211ENST00000615061 FAM174AQ8TBP5 190 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 HTR3CQ8WXA8 447 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 COQ10AQ96MF6 247 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 SLC25A51Q9H1U9 297 aa16.76■□□□□ 0.27
CBWD3-211ENST00000615061 LRP4O75096 1905 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 TCRBV7S2A1N4TA0A589 114 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 K7ESM1 405 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 CYP2A6P11509 494 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 NFKB1P19838 968 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 EIF2B5Q13144 721 aaKnown RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 GALNT3Q14435 633 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 LRRC66Q68CR7 880 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 DCP2Q8IU60 420 aaKnown RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 CBARPQ8N350 705 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 SLC25A45Q8N413 288 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 FUBP1Q96AE4 644 aaKnown RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 TCEAL2Q9H3H9 227 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 KLHL8Q9P2G9 620 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-211ENST00000615061 PPP2R2CQ9Y2T4 447 aa16.75■□□□□ 0.27
CBWD3-211ENST00000615061 ASXL3Q9C0F0 2248 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 HACD1B0YJ81 288 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 TJP3O95049 919 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 ADRB1P08588 477 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 CETN2P41208 172 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 GRK6P43250 576 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 THOP1P52888 689 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 PTSQ03393 145 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 ARHGEF7Q14155 803 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 QPCTQ16769 361 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 ZNF662Q6ZS27 426 aa16.74■□□□□ 0.27
CBWD3-211ENST00000615061 Q6ZVL8 140 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms